Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G194000 Theobroma cacao HOM05D000590 ORTHO05D005739 1.7e-100 369.4 196 100.0
Thecc.02G302600 Theobroma cacao HOM05D000590 ORTHO05D005739 1.6e-74 283.1 185 78.9
Thecc.04G180700 Theobroma cacao HOM05D000590 ORTHO05D005739 3.3e-59 232.3 180 75.0
Gorai.011G144000 Gossypium raimondii HOM05D000590 ORTHO05D005739 7.6e-48 194.5 181 63.5
Gohir.A10G136500 Gossypium hirsutum HOM05D000590 ORTHO05D005739 3.8e-47 192.2 181 61.9
Gohir.D10G130300 Gossypium hirsutum HOM05D000590 ORTHO05D005739 6.6e-44 181.4 187 60.4
COL.COLO4_10182 Corchorus olitorius HOM05D002786 ORTHO05D003493 2.5e-30 136.3 93 72.0
MD04G1028600 Malus domestica HOM05D000590 ORTHO05D005739 4.3e-19 99.0 194 37.1
CiPaw.01G108600 Carya illinoinensis HOM05D000590 ORTHO05D005739 9.7e-19 97.8 186 44.6
MD13G1278800 Malus domestica HOM05D000590 ORTHO05D005739 1.6e-18 97.1 183 38.3
Cpa.g.sc50.132 Carica papaya HOM05D000590 ORTHO05D005739 6.3e-18 95.1 222 39.6
Potri.014G146300 Populus trichocarpa HOM05D000590 ORTHO05D005739 8.2e-18 94.7 182 40.7
Prupe.1G177800 Prunus persica HOM05D000590 ORTHO05D005739 1.4e-17 94.0 198 34.8
Cfa008549 Carpinus fangiana HOM05D000590 ORTHO05D005739 3.1e-17 92.8 188 41.0
Haze_11082 Corylus avellana HOM05D000590 ORTHO05D005739 5.3e-17 92.0 185 39.5
Manes.04G059300 Manihot esculenta HOM05D000590 ORTHO05D005739 6.9e-17 91.7 186 38.2
Potri.002G232800 Populus trichocarpa HOM05D000590 ORTHO05D005739 1.2e-16 90.9 182 39.6
Sabra02G0177600 Salix brachista HOM05D000590 ORTHO05D005739 7.7e-16 88.2 186 40.3
Dinv22651 Davidia involucrata HOM05D000590 ORTHO05D005739 1.0e-15 87.8 158 42.4
Dinv44239 Davidia involucrata HOM05D000590 ORTHO05D005739 1.9e-14 83.6 204 36.3
ClCG08G003700 Citrullus lanatus HOM05D000590 ORTHO05D005739 2.5e-14 83.2 199 38.7
THA.LOC104800910 Tarenaya hassleriana HOM05D000590 ORTHO05D005739 7.2e-14 81.6 200 38.5
TAR362G0932 Trochodendron aralioides HOM05D000590 ORTHO05D005739 2.7e-13 79.7 215 33.0
Atru.chr3.1727 Acer truncatum HOM05D000590 ORTHO05D005739 3.6e-13 79.3 176 38.1
QL10p044299 Quercus lobata HOM05D000590 ORTHO05D005739 3.6e-13 79.3 183 38.3
CsaV3_6G003090 Cucumis sativus L. HOM05D000590 ORTHO05D005739 4.6e-13 79.0 199 40.2
Ciclev10018602m.g Citrus clementina HOM05D000590 ORTHO05D005739 6.7e-12 75.1 206 35.9
MELO3C026117.2 Cucumis melo HOM05D000590 ORTHO05D005739 8.8e-12 74.7 199 38.7
Sed0026193 Sechium edule HOM05D000590 ORTHO05D005739 9.7e-11 71.2 182 33.0
RcHm_v2.0_Chr4g0409981 Rosa chinensis HOM05D000590 ORTHO05D005739 1.7e-10 70.5 156 36.5
FAN07G2789 Fragaria x ananassa HOM05D000590 ORTHO05D005739 1.4e-09 67.4 149 40.9
Hund15143 Selenicereus undatus HOM05D000590 ORTHO05D005739 1.2e-08 64.3 202 35.1
Sed0020632 Sechium edule HOM05D000590 ORTHO05D005739 1.5e-08 63.9 229 30.1
Aa31LG1G8510 Aethionema arabicum HOM05D000590 ORTHO05D005739 1.0e-07 61.2 193 32.1
EL10Ac5g11624 Beta vulgaris HOM05D000590 ORTHO05D005739 1.0e-07 61.2 176 35.8
Ah.12g062200 Amaranthus hybridus HOM05D000590 ORTHO05D005739 1.7e-07 60.5 210 31.4
TWI63G0312 Tripterygium wilfordii HOM05D000590 ORTHO05D005739 1.7e-07 60.5 181 33.7
FAN22G1397 Fragaria x ananassa HOM05D000590 ORTHO05D005739 2.9e-07 59.7 150 40.7
Sc07g0007210 Simmondsia chinensis HOM05D000590 ORTHO05D005739 2.9e-07 59.7 210 31.9
Thhalv10006646m.g Eutrema salsugineum HOM05D000590 ORTHO05D005739 3.8e-07 59.3 181 32.0
FAN17G1987 Fragaria x ananassa HOM05D000590 ORTHO05D005739 6.5e-07 58.5 186 34.4
Psat3g189880 Pisum sativum HOM05D000590 ORTHO05D005739 3.2e-06 56.2 179 33.0
Hma1.2p1_0412F.1_g147170 Hydrangea macrophylla HOM05D000590 ORTHO05D005739 5.5e-06 55.5 195 29.2
AT2G31650 Arabidopsis thaliana HOM05D000590 ORTHO05D005739 7.2e-06 55.1 192 30.2
Carub.0001s0518 Capsella rubella HOM05D000590 ORTHO05D005739 7.2e-06 55.1 193 32.1


User provided reference genes

Program Settings