Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.7e-51 206.1 132 100.0
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 5.0e-27 124.8 120 59.2
Thecc.07G175800 Theobroma cacao HOM05D006944 ORTHO05D009910 9.4e-26 120.6 107 82.2
Duzib187G0900 Durio zibethinus HOM05D006944 ORTHO05D009910 1.8e-24 116.3 110 70.0
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 3.9e-24 115.2 116 72.4
Duzib213G0885 Durio zibethinus HOM05D006944 ORTHO05D186234 4.4e-23 111.7 105 81.0
Gohir.A01G098001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.7e-23 111.3 115 74.8
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.7e-22 109.8 71 78.9
Gohir.A13G124500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.7e-22 108.6 73 76.7
Gorai.002G108000 Gossypium raimondii HOM05D006944 ORTHO05D009910 4.8e-22 108.2 115 73.9
Gohir.D01G082600 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.8e-21 106.3 108 77.8
COL.COLO4_32286 Corchorus olitorius HOM05D006944 ORTHO05D009910 5.3e-21 104.8 63 84.1
Duzib213G1066 Durio zibethinus HOM05D006944 ORTHO05D009910 1.2e-20 103.6 109 75.2
Duzib268G0495 Durio zibethinus HOM05D006944 ORTHO05D009910 1.2e-20 103.6 114 69.3
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 2.6e-20 102.4 103 78.6
Duzib187G0307 Durio zibethinus HOM05D006944 ORTHO05D009910 5.9e-20 101.3 69 76.8
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 1.0e-19 100.5 106 53.8
Gohir.D01G082400 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.2e-18 95.1 108 70.4
Gorai.002G107800 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.2e-17 93.6 65 75.4
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 1.6e-17 93.2 72 66.7
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 1.6e-17 93.2 72 66.7
Gohir.A01G097900 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.1e-17 92.8 108 69.4
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 6.1e-17 91.3 112 46.4
Gohir.A01G097800 Gossypium hirsutum HOM05D006944 ORTHO05D036286 2.3e-16 89.4 102 72.5
Gohir.D01G082300 Gossypium hirsutum HOM05D006944 ORTHO05D036286 1.1e-15 87.0 102 70.6
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 2.0e-15 86.3 112 46.4
COL.COLO4_32292 Corchorus olitorius HOM05D006944 ORTHO05D009910 3.3e-15 85.5 67 68.7
Gorai.002G107700 Gossypium raimondii HOM05D006944 ORTHO05D036286 3.3e-15 85.5 102 69.6
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 3.3e-15 85.5 72 65.3
Duzib128G1583 Durio zibethinus HOM05D006944 ORTHO05D009910 4.4e-15 85.1 111 63.1
COL.COLO4_32290 Corchorus olitorius HOM05D006944 ORTHO05D009910 5.7e-15 84.7 67 67.2
Gorai.013G143500 Gossypium raimondii HOM05D006944 ORTHO05D047841 5.7e-15 84.7 54 79.6
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 9.7e-15 84.0 114 44.7
COL.COLO4_03335 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.3e-14 83.6 60 68.3
Thecc.05G142800 Theobroma cacao HOM05D006944 ORTHO05D035085 1.7e-14 83.2 117 55.6
Thecc.07G164100 Theobroma cacao HOM05D006944 ORTHO05D045182 2.2e-14 82.8 57 70.2
Gohir.D13G128100 Gossypium hirsutum HOM05D006944 ORTHO05D047841 2.8e-14 82.4 54 77.8
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.8e-14 82.4 66 63.6
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 8.2e-14 80.9 66 66.7
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 1.8e-13 79.7 68 61.8
Duzib213G0882 Durio zibethinus HOM05D006944 ORTHO05D009910 2.4e-13 79.3 113 42.5
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 2.4e-13 79.3 72 61.1
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.1e-13 79.0 65 64.6
Gohir.A08G232100 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.1e-13 79.0 65 64.6
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 7.0e-13 77.8 71 54.9
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 9.1e-13 77.4 65 60.0
Duzib093G0469 Durio zibethinus HOM05D006944 ORTHO05D035085 1.6e-12 76.6 113 45.1
Duzib128G1252 Durio zibethinus HOM05D006944 ORTHO05D186093 2.0e-12 76.3 71 60.6
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 2.6e-12 75.9 66 60.6
Thecc.02G007500 Theobroma cacao HOM05D006944 ORTHO05D013071 2.6e-12 75.9 70 51.4
Gohir.D13G128600 Gossypium hirsutum HOM05D006944 ORTHO05D046837 3.5e-12 75.5 67 58.2
Thecc.07G174800 Theobroma cacao HOM05D006944 ORTHO05D009910 3.5e-12 75.5 64 59.4
Thecc.05G191800 Theobroma cacao HOM05D006944 ORTHO05D407174 5.9e-12 74.7 66 59.1
Gorai.013G144700 Gossypium raimondii HOM05D006944 ORTHO05D046837 7.7e-12 74.3 67 58.2
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 1.3e-11 73.6 69 53.6
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.8e-11 72.0 99 42.4
Gohir.D02G239500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.8e-11 72.0 69 52.2
Duzib187G0992 Durio zibethinus HOM05D006944 ORTHO05D045182 8.5e-11 70.9 53 71.7
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 8.5e-11 70.9 68 54.4
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.1e-10 70.5 60 63.3
Gorai.005G267700 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.1e-10 70.5 65 55.4
Duzib211G0488 Durio zibethinus HOM05D006944 ORTHO05D009910 1.5e-10 70.1 60 55.0
Potri.001G078200 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.5e-10 69.3 60 58.3
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 4.2e-10 68.6 65 53.8
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 7.2e-10 67.8 66 50.0
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 7.2e-10 67.8 103 39.8
Sabra01G0055400 Salix brachista HOM05D006944 ORTHO05D009910 7.2e-10 67.8 103 38.8
Duzib093G0807 Durio zibethinus HOM05D006944 ORTHO05D035085 9.4e-10 67.4 113 58.4
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 9.4e-10 67.4 67 55.2
TWI38G2111 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 9.4e-10 67.4 69 53.6
Gohir.D13G128501 Gossypium hirsutum HOM05D006944 ORTHO05D048163 1.2e-09 67.0 115 35.7
COL.COLO4_03334 Corchorus olitorius HOM05D006944 ORTHO05D015628 3.6e-09 65.5 62 53.2
Duzib187G1015 Durio zibethinus HOM05D006944 ORTHO05D013071 3.6e-09 65.5 65 50.8
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 3.6e-09 65.5 66 48.5
Gorai.013G144500 Gossypium raimondii HOM05D006944 ORTHO05D048163 6.1e-09 64.7 111 36.0
TWI15G0253 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 6.1e-09 64.7 69 52.2
Duzib052G0351 Durio zibethinus HOM05D006944 ORTHO05D013071 8.0e-09 64.3 62 58.1
COL.COLO4_17646 Corchorus olitorius HOM05D006944 ORTHO05D013071 1.8e-08 63.2 51 62.7
Gorai.013G144400 Gossypium raimondii HOM05D006944 ORTHO05D047026 1.8e-08 63.2 51 60.8
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 1.8e-08 63.2 69 50.7
Gohir.D13G128451 Gossypium hirsutum HOM05D006944 ORTHO05D047026 3.0e-08 62.4 52 57.7
Gorai.008G048900 Gossypium raimondii HOM05D006944 ORTHO05D013071 4.0e-08 62.0 55 56.4
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 6.7e-08 61.2 68 48.5
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 8.8e-08 60.8 60 55.0
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 1.5e-07 60.1 66 48.5
TWI38G0902 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.0e-07 59.7 69 47.8
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 2.6e-07 59.3 66 43.9
COL.COLO4_12073 Corchorus olitorius HOM05D006944 ORTHO05D013071 3.3e-07 58.9 53 52.8
Gohir.A12G047500 Gossypium hirsutum HOM05D006944 ORTHO05D013071 3.3e-07 58.9 52 57.7
Gohir.D12G046200 Gossypium hirsutum HOM05D006944 ORTHO05D013071 3.3e-07 58.9 52 57.7
Gorai.008G048800 Gossypium raimondii HOM05D006944 ORTHO05D013071 3.3e-07 58.9 52 57.7
Potri.001G131500 Populus trichocarpa HOM05D006944 ORTHO05D009910 3.3e-07 58.9 69 46.4
TWI38G0421 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.3e-07 58.9 69 47.8
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.4e-07 58.5 65 53.8
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 4.4e-07 58.5 102 38.2
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 4.4e-07 58.5 102 38.2
Duzib132G0178 Durio zibethinus HOM05D006944 ORTHO05D013071 5.7e-07 58.2 47 61.7
Gohir.D13G128401 Gossypium hirsutum HOM05D006944 ORTHO05D048132 7.5e-07 57.8 62 46.8
Thecc.01G140100 Theobroma cacao HOM05D006944 ORTHO05D013071 1.3e-06 57.0 55 52.7
Thecc.02G007200 Theobroma cacao HOM05D006944 ORTHO05D013071 1.3e-06 57.0 57 47.4
Gohir.A12G047400 Gossypium hirsutum HOM05D006944 ORTHO05D013071 1.7e-06 56.6 50 58.0
TWI38G0857 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 1.7e-06 56.6 69 44.9
Sabra01G0055300 Salix brachista HOM05D011228 ORTHO05D015182 2.8e-06 55.8 68 48.5
Gorai.013G144300 Gossypium raimondii HOM05D006944 ORTHO05D048132 3.7e-06 55.5 55 49.1
Gohir.D02G047150 Gossypium hirsutum HOM05D059296 ORTHO05D047772 6.3e-06 54.7 40 65.0
Gorai.005G052200 Gossypium raimondii HOM05D059296 ORTHO05D047772 6.3e-06 54.7 40 65.0
Thecc.01G139600 Theobroma cacao HOM05D006944 ORTHO05D013071 6.3e-06 54.7 52 51.9
COL.COLO4_12078 Corchorus olitorius HOM05D006944 ORTHO05D009910 8.2e-06 54.3 49 53.1
Gohir.A13G124825 Gossypium hirsutum HOM05D006944 ORTHO05D009910 8.2e-06 54.3 62 43.5


User provided reference genes

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