Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 7.6e-50 200.7 141 100.0
Duzib213G1066 Durio zibethinus HOM05D006944 ORTHO05D009910 7.7e-26 120.9 125 79.2
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 9.4e-24 114.0 136 53.7
Duzib268G0495 Durio zibethinus HOM05D006944 ORTHO05D009910 7.9e-23 110.9 116 75.9
Duzib213G0885 Durio zibethinus HOM05D006944 ORTHO05D186234 6.7e-22 107.8 107 83.2
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 4.8e-20 101.7 103 78.6
Gorai.002G107800 Gossypium raimondii HOM05D006944 ORTHO05D009910 8.2e-20 100.9 130 69.2
Gohir.A01G097900 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.4e-19 100.1 130 68.5
Gohir.A01G098001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.4e-19 100.1 128 65.6
Gohir.D01G082400 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.4e-19 100.1 130 67.7
Duzib187G0900 Durio zibethinus HOM05D006944 ORTHO05D009910 5.3e-19 98.2 108 66.7
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 5.3e-19 98.2 70 71.4
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 9.1e-19 97.4 66 74.2
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.2e-18 97.1 67 76.1
Gohir.A13G124500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.2e-18 97.1 67 73.1
Thecc.07G175800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.2e-18 97.1 104 76.9
Gorai.002G108000 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.0e-17 94.0 128 64.8
COL.COLO4_03335 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.7e-17 93.2 124 73.4
Gohir.D01G082600 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.2e-17 92.8 67 73.1
COL.COLO4_32286 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.1e-16 90.5 59 76.3
Thecc.05G142800 Theobroma cacao HOM05D006944 ORTHO05D035085 1.9e-16 89.7 66 65.2
Duzib128G1583 Durio zibethinus HOM05D006944 ORTHO05D009910 4.2e-16 88.6 111 68.5
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 4.2e-16 88.6 112 45.5
Duzib187G0307 Durio zibethinus HOM05D006944 ORTHO05D009910 7.2e-16 87.8 66 68.2
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 9.4e-16 87.4 62 71.0
Duzib213G0882 Durio zibethinus HOM05D006944 ORTHO05D009910 7.9e-15 84.3 71 67.6
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.0e-14 84.0 61 68.9
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 2.3e-14 82.8 65 64.6
COL.COLO4_32292 Corchorus olitorius HOM05D006944 ORTHO05D009910 3.0e-14 82.4 63 69.8
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 3.0e-14 82.4 63 66.7
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 3.0e-14 82.4 63 66.7
Duzib128G1252 Durio zibethinus HOM05D006944 ORTHO05D186093 3.9e-14 82.0 72 62.5
COL.COLO4_32290 Corchorus olitorius HOM05D006944 ORTHO05D009910 5.2e-14 81.6 63 68.3
Thecc.05G191800 Theobroma cacao HOM05D006944 ORTHO05D407174 5.2e-14 81.6 65 63.1
Gohir.A01G097800 Gossypium hirsutum HOM05D006944 ORTHO05D036286 6.7e-14 81.3 62 71.0
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 1.1e-13 80.5 61 68.9
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.1e-13 80.5 63 68.3
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 7.4e-13 77.8 61 65.6
Gohir.A08G232100 Gossypium hirsutum HOM05D006944 ORTHO05D009910 7.4e-13 77.8 61 65.6
Thecc.07G164100 Theobroma cacao HOM05D006944 ORTHO05D045182 7.4e-13 77.8 64 60.9
Thecc.07G174800 Theobroma cacao HOM05D006944 ORTHO05D009910 7.4e-13 77.8 62 64.5
Gorai.002G107700 Gossypium raimondii HOM05D006944 ORTHO05D036286 9.7e-13 77.4 61 67.2
Thecc.02G007500 Theobroma cacao HOM05D006944 ORTHO05D013071 9.7e-13 77.4 70 51.4
Duzib093G0469 Durio zibethinus HOM05D006944 ORTHO05D035085 1.3e-12 77.0 118 44.9
Gohir.D01G082300 Gossypium hirsutum HOM05D006944 ORTHO05D036286 1.3e-12 77.0 61 67.2
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.7e-12 76.6 63 66.7
Gorai.013G143500 Gossypium raimondii HOM05D006944 ORTHO05D047841 2.8e-12 75.9 52 73.1
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 2.8e-12 75.9 63 60.3
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 4.8e-12 75.1 59 64.4
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 8.2e-12 74.3 62 62.9
Duzib187G1015 Durio zibethinus HOM05D006944 ORTHO05D013071 1.1e-11 73.9 73 52.1
Gohir.D13G128100 Gossypium hirsutum HOM05D006944 ORTHO05D047841 1.4e-11 73.6 52 71.2
Gohir.D13G128600 Gossypium hirsutum HOM05D006944 ORTHO05D046837 5.3e-11 71.6 63 60.3
Gorai.013G144700 Gossypium raimondii HOM05D006944 ORTHO05D046837 5.3e-11 71.6 63 60.3
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 7.0e-11 71.2 56 66.1
Gorai.005G267700 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.2e-10 70.5 123 43.1
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.6e-10 70.1 59 59.3
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 1.6e-10 70.1 124 36.3
Duzib093G0807 Durio zibethinus HOM05D006944 ORTHO05D035085 2.0e-10 69.7 118 59.3
Gorai.013G144500 Gossypium raimondii HOM05D006944 ORTHO05D048163 2.0e-10 69.7 72 47.2
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 2.6e-10 69.3 130 34.6
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 3.5e-10 68.9 65 58.5
Gohir.D13G128501 Gossypium hirsutum HOM05D006944 ORTHO05D048163 4.5e-10 68.6 67 49.3
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.0e-09 67.4 66 54.5
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 1.3e-09 67.0 130 40.8
Gohir.D02G239500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.9e-09 65.9 67 49.3
Duzib211G0488 Durio zibethinus HOM05D006944 ORTHO05D009910 3.8e-09 65.5 62 50.0
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 1.1e-08 63.9 62 50.0
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 1.1e-08 63.9 61 54.1
Duzib052G0351 Durio zibethinus HOM05D006944 ORTHO05D013071 1.5e-08 63.5 60 58.3
Potri.001G078200 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.5e-08 62.8 56 57.1
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 3.2e-08 62.4 66 51.5
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 3.2e-08 62.4 66 51.5
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 4.2e-08 62.0 51 64.7
TWI38G2111 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 4.2e-08 62.0 65 52.3
COL.COLO4_17646 Corchorus olitorius HOM05D006944 ORTHO05D013071 7.2e-08 61.2 53 58.5
Duzib187G0992 Durio zibethinus HOM05D006944 ORTHO05D045182 9.4e-08 60.8 53 62.3
COL.COLO4_03334 Corchorus olitorius HOM05D006944 ORTHO05D015628 1.2e-07 60.5 62 51.6
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 1.2e-07 60.5 56 58.9
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 1.2e-07 60.5 62 48.4
Thecc.02G007200 Theobroma cacao HOM05D006944 ORTHO05D013071 1.6e-07 60.1 57 50.9
Potri.003G152900 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.1e-07 59.7 56 53.6
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 2.1e-07 59.7 62 46.8
Sabra01G0055400 Salix brachista HOM05D006944 ORTHO05D009910 2.7e-07 59.3 56 53.6
TWI15G0253 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.7e-07 59.3 65 50.8
Thecc.01G139600 Theobroma cacao HOM05D006944 ORTHO05D013071 3.6e-07 58.9 60 50.0
COL.COLO4_12073 Corchorus olitorius HOM05D006944 ORTHO05D013071 4.7e-07 58.5 55 49.1
Gorai.008G048900 Gossypium raimondii HOM05D006944 ORTHO05D013071 6.1e-07 58.2 56 51.8
Thecc.01G140100 Theobroma cacao HOM05D006944 ORTHO05D013071 6.1e-07 58.2 60 50.0
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 8.0e-07 57.8 56 51.8
Sabra16G0287300 Salix brachista HOM05D014998 ORTHO05D018092 1.0e-06 57.4 56 53.6
Gorai.013G144400 Gossypium raimondii HOM05D006944 ORTHO05D047026 1.8e-06 56.6 51 54.9
Potri.001G131500 Populus trichocarpa HOM05D006944 ORTHO05D009910 1.8e-06 56.6 57 50.9
Sabra16G0286700 Salix brachista HOM05D014998 ORTHO05D018092 1.8e-06 56.6 61 50.8
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.3e-06 56.2 61 54.1
Sabra03G0111100 Salix brachista HOM05D006944 ORTHO05D009910 2.3e-06 56.2 55 52.7
Thecc.02G007800 Theobroma cacao HOM05D006944 ORTHO05D013071 2.3e-06 56.2 53 54.7
Duzib132G0178 Durio zibethinus HOM05D006944 ORTHO05D013071 3.0e-06 55.8 47 59.6
Gohir.D13G128451 Gossypium hirsutum HOM05D006944 ORTHO05D047026 3.0e-06 55.8 52 51.9
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 3.0e-06 55.8 64 45.3
TWI38G0421 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.0e-06 55.8 65 46.2
TWI38G0902 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.0e-06 55.8 65 44.6
Gohir.D13G128401 Gossypium hirsutum HOM05D006944 ORTHO05D048132 4.0e-06 55.5 59 44.1
Sabra01G0055300 Salix brachista HOM05D011228 ORTHO05D015182 4.0e-06 55.5 66 45.5
Sabra16G0287100 Salix brachista HOM05D014998 ORTHO05D018092 4.0e-06 55.5 57 50.9
Duzib132G0544 Durio zibethinus HOM05D006944 ORTHO05D013071 5.2e-06 55.1 55 45.5
Gohir.A12G047500 Gossypium hirsutum HOM05D006944 ORTHO05D013071 5.2e-06 55.1 53 52.8
Gohir.D12G046200 Gossypium hirsutum HOM05D006944 ORTHO05D013071 5.2e-06 55.1 53 52.8
Gorai.008G048800 Gossypium raimondii HOM05D006944 ORTHO05D013071 5.2e-06 55.1 53 52.8
Sabra16G0286600 Salix brachista HOM05D014998 ORTHO05D018092 5.2e-06 55.1 61 49.2
Thecc.02G007400 Theobroma cacao HOM05D006944 ORTHO05D013071 5.2e-06 55.1 54 51.9
TWI38G1226 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 5.2e-06 55.1 64 45.3
Sabra16G0286900 Salix brachista HOM05D014998 ORTHO05D018092 8.8e-06 54.3 60 50.0


User provided reference genes

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