Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G173900 Theobroma cacao HOM05D011997 ORTHO05D015628 4.8e-49 198.0 136 100.0
Thecc.07G174000 Theobroma cacao HOM05D011997 ORTHO05D015628 6.9e-24 114.4 106 88.7
Thecc.07G174200 Theobroma cacao HOM05D011997 ORTHO05D015628 9.0e-24 114.0 106 85.8
Thecc.07G174400 Theobroma cacao HOM05D011997 ORTHO05D015628 9.0e-24 114.0 106 85.8
Thecc.07G174600 Theobroma cacao HOM05D011997 ORTHO05D015628 9.0e-24 114.0 106 85.8
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 2.7e-12 75.9 56 58.9
Gohir.D13G128266 Gossypium hirsutum HOM05D011997 ORTHO05D015628 8.8e-11 70.9 59 54.2
COL.COLO4_03334 Corchorus olitorius HOM05D006944 ORTHO05D015628 2.0e-10 69.7 49 67.3
Gohir.D13G128300 Gossypium hirsutum HOM05D011997 ORTHO05D015628 2.6e-10 69.3 53 62.3
Gohir.D13G128350 Gossypium hirsutum HOM05D011997 ORTHO05D015628 2.6e-10 69.3 53 62.3
Gorai.013G144200 Gossypium raimondii HOM05D011997 ORTHO05D015628 2.6e-10 69.3 53 62.3
Gohir.A13G124800 Gossypium hirsutum HOM05D011997 ORTHO05D015628 5.7e-10 68.2 52 61.5
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 1.3e-09 67.0 58 50.0
Gorai.013G144000 Gossypium raimondii HOM05D011997 ORTHO05D015628 2.2e-09 66.2 53 60.4
COL.COLO4_32293 Corchorus olitorius HOM05D011997 ORTHO05D163488 2.4e-08 62.8 38 78.9
Duzib211G0488 Durio zibethinus HOM05D006944 ORTHO05D009910 2.4e-08 62.8 51 52.9
Gorai.001G236600 Gossypium raimondii HOM05D011192 ORTHO05D015638 3.1e-08 62.4 58 46.6
Gohir.D13G128401 Gossypium hirsutum HOM05D006944 ORTHO05D048132 9.1e-08 60.8 58 44.8
Gorai.001G236900 Gossypium raimondii HOM05D011192 ORTHO05D047871 9.1e-08 60.8 55 50.9
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 9.1e-08 60.8 56 48.2
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 1.5e-07 60.1 55 50.9
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.0e-07 59.7 56 48.2
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.0e-07 59.7 58 46.6
Thecc.05G191800 Theobroma cacao HOM05D006944 ORTHO05D407174 2.0e-07 59.7 56 46.4
Gohir.A07G203400 Gossypium hirsutum HOM05D011192 ORTHO05D015638 2.6e-07 59.3 56 46.4
Gohir.D07G209600 Gossypium hirsutum HOM05D011192 ORTHO05D015638 2.6e-07 59.3 58 44.8
Gorai.013G144300 Gossypium raimondii HOM05D006944 ORTHO05D048132 2.6e-07 59.3 58 44.8
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 2.6e-07 59.3 56 46.4
Gohir.A07G203600 Gossypium hirsutum HOM05D011192 ORTHO05D015638 3.4e-07 58.9 58 44.8
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.4e-07 58.9 52 53.8
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 3.4e-07 58.9 54 53.7
Gohir.A07G203500 Gossypium hirsutum HOM05D011192 ORTHO05D015638 4.5e-07 58.5 66 42.4
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 5.9e-07 58.2 58 39.7
Gohir.A13G124825 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.9e-07 58.2 58 43.1
Gohir.A07G203550 Gossypium hirsutum HOM05D011192 ORTHO05D015638 7.7e-07 57.8 65 41.5
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.0e-06 57.4 56 48.2
TWI63G1346 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 1.0e-06 57.4 53 50.9
Thecc.07G175800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.3e-06 57.0 69 43.5
COL.COLO4_32286 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.7e-06 56.6 56 46.4
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 1.7e-06 56.6 56 42.9
Duzib128G1252 Durio zibethinus HOM05D006944 ORTHO05D186093 2.2e-06 56.2 69 40.6
Gorai.013G143800 Gossypium raimondii HOM05D011997 ORTHO05D047178 2.2e-06 56.2 45 53.3
Gorai.001G236700 Gossypium raimondii HOM05D011192 ORTHO05D015638 2.9e-06 55.8 61 45.9
Duzib128G1583 Durio zibethinus HOM05D006944 ORTHO05D009910 3.8e-06 55.5 56 46.4
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.8e-06 55.5 52 51.9
Gohir.A08G232100 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.8e-06 55.5 52 51.9
Gohir.A13G124700 Gossypium hirsutum HOM05D011997 ORTHO05D047178 3.8e-06 55.5 44 56.8
TWI63G0079 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 3.8e-06 55.5 53 49.1
Gohir.D07G209633 Gossypium hirsutum HOM05D011192 ORTHO05D015638 5.0e-06 55.1 61 45.9
Gorai.001G236800 Gossypium raimondii HOM05D011192 ORTHO05D015638 5.0e-06 55.1 61 45.9
Sabra01G0055400 Salix brachista HOM05D006944 ORTHO05D009910 5.0e-06 55.1 58 46.6
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 5.0e-06 55.1 55 43.6
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 6.5e-06 54.7 56 41.1
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 6.5e-06 54.7 56 46.4
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 8.5e-06 54.3 56 46.4
Potri.003G152900 Populus trichocarpa HOM05D006944 ORTHO05D009910 8.5e-06 54.3 49 49.0


User provided reference genes

Program Settings