Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 3.2e-66 255.0 134 100.0
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 5.7e-39 164.5 91 95.6
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 7.0e-37 157.5 91 91.2
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 7.0e-37 157.5 91 91.2
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 7.0e-37 157.5 91 91.2
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.7e-35 152.9 91 90.1
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 5.0e-35 151.4 91 89.0
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.5e-34 149.8 116 70.7
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 2.5e-34 149.1 91 84.6
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 5.6e-34 147.9 91 84.6
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.2e-33 146.7 92 82.6
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.6e-33 146.4 107 72.9
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 2.1e-33 146.0 91 83.5
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 3.6e-33 145.2 90 82.2
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 3.6e-33 145.2 91 83.5
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 6.2e-33 144.4 91 81.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 8.0e-33 144.1 91 81.3
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 8.0e-33 144.1 89 83.1
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 1.0e-32 143.7 91 79.1
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 1.0e-32 143.7 91 81.3
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.0e-32 143.7 90 82.2
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.0e-32 143.7 90 82.2
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.4e-32 143.3 89 83.1
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.8e-32 142.9 91 80.2
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.8e-32 142.9 91 81.3
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.8e-32 142.9 91 80.2
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.3e-32 142.5 91 79.1
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 3.1e-32 142.1 91 82.4
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 3.1e-32 142.1 91 81.3
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 5.2e-32 141.4 91 78.0
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 6.8e-32 141.0 91 80.2
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 6.8e-32 141.0 91 76.9
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 8.9e-32 140.6 85 83.5
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 1.2e-31 140.2 91 80.2
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.5e-31 139.8 85 82.4
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.5e-31 139.8 92 76.1
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 2.0e-31 139.4 91 76.9
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 2.0e-31 139.4 90 78.9
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 2.0e-31 139.4 90 78.9
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 2.0e-31 139.4 86 81.4
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.0e-31 139.4 89 78.7
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.6e-31 139.0 93 76.3
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.4e-31 138.7 89 79.8
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 4.4e-31 138.3 92 76.1
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 5.8e-31 137.9 91 76.9
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 5.8e-31 137.9 91 75.8
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 5.8e-31 137.9 91 76.9
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 7.5e-31 137.5 86 77.9
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 7.5e-31 137.5 91 76.9
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 9.8e-31 137.1 131 61.1
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 9.8e-31 137.1 86 79.1
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.2e-30 136.0 91 76.9
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 2.2e-30 136.0 90 77.8
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 3.7e-30 135.2 86 79.1
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 3.7e-30 135.2 87 78.2
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 4.9e-30 134.8 89 76.4
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 6.4e-30 134.4 87 77.0
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 8.3e-30 134.0 86 77.9
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 1.4e-29 133.3 86 77.9
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.4e-29 132.5 89 77.5
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 2.4e-29 132.5 90 77.8
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 4.1e-29 131.7 89 78.7
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 7.0e-29 131.0 93 73.1
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 7.0e-29 131.0 124 61.3
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 9.2e-29 130.6 87 74.7
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 1.2e-28 130.2 86 75.6
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 2.7e-28 129.0 87 75.9
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 4.6e-28 128.3 89 73.0
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 6.0e-28 127.9 84 75.0
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 6.0e-28 127.9 82 79.3
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 6.0e-28 127.9 86 73.3
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 2.3e-27 125.9 86 73.3
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.0e-27 125.6 83 78.3
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 3.0e-27 125.6 86 70.9
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 5.0e-27 124.8 84 76.2
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 6.6e-27 124.4 85 74.1
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 8.6e-27 124.0 74 86.5
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 8.6e-27 124.0 86 70.9
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 1.1e-26 123.6 89 77.5
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 1.1e-26 123.6 93 68.8
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.5e-26 123.2 83 74.7
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.5e-26 123.2 87 70.1
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.3e-26 122.1 83 77.1
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 5.6e-26 121.3 83 73.5
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 9.5e-26 120.6 81 72.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 1.6e-25 119.8 83 73.5
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 3.6e-25 118.6 86 70.9
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 4.7e-25 118.2 84 70.2
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 4.7e-25 118.2 84 70.2
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 6.2e-25 117.9 88 70.5
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-24 117.1 71 83.1
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.4e-24 116.7 84 69.0
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 3.1e-24 115.5 79 73.4
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 5.2e-24 114.8 83 67.5
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 8.9e-24 114.0 83 67.5
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.2e-23 113.6 82 68.3
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.5e-23 113.2 82 68.3
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 2.0e-23 112.8 82 67.1
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 3.4e-23 112.1 82 67.1
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 3.4e-23 112.1 82 67.1
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 3.4e-23 112.1 82 67.1
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 3.4e-23 112.1 82 67.1
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 1.3e-22 110.2 82 65.9
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 2.2e-22 109.4 82 65.9
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 2.2e-22 109.4 82 65.9
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 4.1e-21 105.1 91 64.8
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 2.7e-20 102.4 79 65.8
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.7e-19 99.8 65 78.5
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 2.3e-19 99.4 87 56.3
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 3.3e-18 95.5 86 57.0
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.6e-17 93.2 60 78.3
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.1e-16 90.5 68 67.6
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 8.9e-16 87.4 82 57.3
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 2.6e-15 85.9 58 77.6
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 1.3e-14 83.6 82 54.9
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.4e-13 80.1 61 63.9
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 1.4e-13 80.1 63 61.9
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 5.4e-13 78.2 60 68.3
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 7.1e-13 77.8 49 79.6
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.2e-12 77.0 60 71.7
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 7.8e-12 74.3 50 76.0
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.1e-10 70.5 111 48.6
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-08 63.9 52 61.5
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-08 63.9 52 61.5


User provided reference genes

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