Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 0.0e+00 1657.9 820 100.0
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 0.0e+00 1307.0 816 81.0
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 0.0e+00 1259.2 814 77.5
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 2.5e-262 909.1 819 57.6
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 1.6e-256 889.8 819 56.4
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 4.0e-252 875.2 827 55.0
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 9.9e-251 870.5 823 54.6
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 2.4e-249 865.9 852 53.2
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 3.5e-248 862.1 788 55.7
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 3.5e-248 862.1 826 55.0
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.0e-247 860.5 814 54.8
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 6.2e-245 851.3 823 54.4
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 1.5e-235 820.1 828 52.3
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 4.5e-235 818.5 810 52.8
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 2.9e-234 815.8 828 52.4
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 3.1e-228 795.8 775 53.3
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 3.1e-228 795.8 775 53.3
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 6.9e-228 794.7 828 51.3
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 1.7e-226 790.0 828 51.6
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 1.1e-225 787.3 816 51.6
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 1.1e-220 770.8 836 49.6
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 1.8e-220 770.0 825 49.3
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 1.2e-216 757.3 816 49.1
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 1.7e-213 746.9 829 47.5
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 5.3e-212 741.9 828 47.7
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 9.1e-212 741.1 834 47.8
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 3.8e-210 735.7 814 46.7
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 5.0e-210 735.3 834 47.5
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 3.2e-209 732.6 814 47.7
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 1.6e-208 730.3 826 46.9
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 8.0e-208 728.0 831 47.1
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 3.3e-206 722.6 814 46.4
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 4.4e-206 722.2 809 47.7
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 4.8e-205 718.8 814 46.7
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 8.2e-205 718.0 812 46.1
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 7.0e-204 714.9 814 46.3
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 1.6e-203 713.8 819 47.5
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 2.7e-203 713.0 818 47.6
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 1.3e-202 710.7 822 47.3
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 2.5e-201 706.4 806 46.2
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 1.0e-199 701.0 823 47.0
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 1.4e-199 700.7 814 45.6
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 3.0e-199 699.5 815 45.2
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 4.0e-199 699.1 842 44.9
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 7.5e-198 694.9 836 45.1
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 1.7e-197 693.7 815 45.2
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 2.2e-197 693.3 814 46.3
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 9.1e-196 688.0 814 45.6
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 5.0e-194 682.2 802 46.1
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 8.6e-194 681.4 650 52.8
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 1.2e-192 677.6 775 46.7
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 8.0e-192 674.9 822 44.5
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 1.0e-191 674.5 799 48.1
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 6.8e-191 671.8 836 45.2
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 7.5e-190 668.3 804 46.0
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.1e-188 664.5 825 44.6
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 7.0e-188 661.8 772 46.2
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 2.5e-185 653.3 834 44.5
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 3.6e-184 649.4 811 44.4
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 4.7e-184 649.0 834 44.6
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 4.4e-182 642.5 824 43.1
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 2.2e-181 640.2 821 43.6
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 8.3e-181 638.3 820 43.8
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 1.9e-177 627.1 840 43.3
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 2.5e-177 626.7 829 40.9
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 9.5e-177 624.8 783 44.1
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 5.8e-174 615.5 624 52.4
Gohir.A13G153099 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.9e-173 613.2 488 69.1
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 5.4e-172 609.0 813 43.5
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 1.2e-171 607.8 829 41.1
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 7.8e-171 605.1 824 41.4
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 1.7e-170 604.0 555 55.0
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 4.9e-165 585.9 728 43.8
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 2.1e-163 580.5 374 76.7
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 5.2e-159 565.8 813 39.7
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 6.4e-157 558.9 739 42.5
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 3.2e-156 556.6 743 42.0
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 3.0e-154 550.1 828 38.5
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 2.3e-146 523.9 812 38.3
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 2.9e-141 506.9 728 41.8
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 2.8e-136 490.3 823 37.1
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 5.1e-130 469.5 550 42.0
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 1.9e-129 467.6 646 40.6
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 5.6e-129 466.1 549 44.6
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 4.5e-126 456.4 829 35.2
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 3.1e-119 433.7 517 44.1
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 4.1e-119 433.3 522 44.1
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 2.9e-117 427.2 739 35.0
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.1e-116 425.2 819 34.9
PGSC0003DMG401011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 1.8e-111 407.9 441 49.2
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 5.3e-103 379.8 838 30.5
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 4.5e-102 376.7 224 79.0
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 5.0e-101 373.2 381 53.5
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 8.5e-85 319.3 377 46.2
Gohir.D13G157600 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.0e-74 285.8 190 78.9
HPP92_026349 Vanilla planifolia HOM05D005971 ORTHO05D007459 3.9e-69 267.3 501 35.7
Atru.chr12.2180 Acer truncatum HOM05D005971 ORTHO05D007459 1.3e-64 252.3 223 60.1
CARHR003730 Cardamine hirsuta HOM05D005971 ORTHO05D007459 2.5e-60 238.0 239 51.0
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 1.8e-58 231.9 253 49.4
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 9.8e-57 226.1 860 25.8
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 1.7e-56 225.3 802 26.9
Peaxi162Scf01123g00008 Petunia axillaris HOM05D005971 ORTHO05D007459 2.4e-55 221.5 235 47.7
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 5.2e-50 203.8 423 30.7
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 7.8e-46 189.9 228 43.0
GSVIVG01020426001 Vitis vinifera HOM05D005971 ORTHO05D007459 3.4e-41 174.5 177 51.4
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 2.2e-40 171.8 372 32.8
COL.COLO4_20820 Corchorus olitorius HOM05D005971 ORTHO05D007459 3.4e-33 147.9 97 74.2
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 6.4e-32 143.7 139 46.8
Glyma.13G358366 Glycine max HOM05D005971 ORTHO05D007459 9.6e-28 129.8 148 48.0
Glyma.13G098800 Glycine max HOM05D005971 ORTHO05D007459 2.1e-27 128.6 148 48.0
C03p00610 Brassica napus HOM05D005971 ORTHO05D040551 3.4e-25 121.3 155 43.9
Zm00001eb395680 Zea mays HOM05D005971 ORTHO05D007459 2.9e-24 118.2 253 30.4
Glyma.13G358300 Glycine max HOM05D005971 ORTHO05D007459 4.0e-18 97.8 179 35.8
BolC3t12626H Brassica oleracea HOM05D005971 ORTHO05D040551 4.2e-15 87.8 158 36.1
Sc06g0001570 Simmondsia chinensis HOM05D005971 ORTHO05D007459 4.6e-14 84.3 99 48.5
Glyma.13G052600 Glycine max HOM05D005971 ORTHO05D007459 2.5e-12 78.6 126 38.1
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 5.7e-12 77.4 115 36.5
Glyma.08G171600 Glycine max HOM05D005971 ORTHO05D007459 4.2e-07 61.2 52 59.6
GSVIVG01020432001 Vitis vinifera HOM05D005971 ORTHO05D007459 7.1e-07 60.5 78 41.0


User provided reference genes

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