Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 8.4e-31 136.3 67 100.0
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 5.3e-25 117.1 67 83.6
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 5.3e-25 117.1 67 83.6
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 2.0e-24 115.2 67 82.1
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 4.5e-24 114.0 67 82.1
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 1.1e-22 109.4 67 77.6
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 3.2e-14 81.3 70 61.4
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 3.2e-14 81.3 71 64.8
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 2.1e-13 78.6 60 63.3
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 2.7e-13 78.2 67 59.7
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 2.7e-13 78.2 51 68.6
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 2.7e-13 78.2 75 61.3
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 3.5e-13 77.8 68 60.3
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 4.6e-13 77.4 67 58.2
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 4.6e-13 77.4 51 68.6
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 4.6e-13 77.4 46 73.9
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 6.0e-13 77.0 46 73.9
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 1.3e-12 75.9 53 66.0
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 3.0e-12 74.7 66 56.1
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 5.1e-12 73.9 72 54.2
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 6.7e-12 73.6 69 56.5
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 1.1e-11 72.8 71 56.3
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 1.5e-11 72.4 54 63.0
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 1.9e-11 72.0 56 57.1
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 2.5e-11 71.6 69 58.0
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 3.3e-11 71.2 61 57.4
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.6e-11 70.5 51 62.7
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 9.6e-11 69.7 54 61.1
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 9.6e-11 69.7 57 57.9
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 1.6e-10 68.9 55 60.0
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 3.7e-10 67.8 46 67.4
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 8.2e-10 66.6 66 45.5
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 1.1e-09 66.2 66 47.0
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 1.4e-09 65.9 46 67.4
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 1.4e-09 65.9 46 63.0
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 1.8e-09 65.5 64 53.1
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 2.4e-09 65.1 44 70.5
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 4.0e-09 64.3 44 63.6
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 9.0e-09 63.2 54 57.4
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 1.5e-08 62.4 44 61.4
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 2.0e-08 62.0 44 56.8
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 2.6e-08 61.6 44 61.4
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 2.6e-08 61.6 44 61.4
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 2.6e-08 61.6 43 60.5
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 3.4e-08 61.2 44 56.8
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 5.8e-08 60.5 44 59.1
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 5.8e-08 60.5 48 58.3
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 7.6e-08 60.1 61 49.2
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 1.7e-07 58.9 44 54.5
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 2.9e-07 58.2 45 57.8
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 2.9e-07 58.2 45 57.8
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 6.5e-07 57.0 65 47.7
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 3.2e-06 54.7 40 57.5


User provided reference genes

Program Settings