Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 0.0e+00 1091.6 579 100.0
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 7.7e-282 973.4 578 90.3
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 9.7e-277 956.4 583 85.1
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 8.8e-270 933.3 589 83.9
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 7.5e-269 930.2 587 84.2
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 9.7e-269 929.9 591 83.2
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 3.1e-267 924.9 506 97.6
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 6.4e-220 767.7 583 67.9
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 2.7e-218 762.3 581 72.5
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 7.3e-216 754.2 594 66.5
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 9.6e-216 753.8 590 66.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.6e-215 753.1 617 69.9
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.1e-214 750.4 608 66.4
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 6.9e-214 747.7 598 65.2
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.8e-212 741.9 627 64.3
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 6.4e-212 741.1 605 69.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 6.0e-210 734.6 617 62.7
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 6.0e-210 734.6 637 64.2
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 2.3e-209 732.6 611 68.7
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 8.7e-209 730.7 613 63.8
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.5e-208 729.9 587 63.5
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.3e-208 728.4 608 61.3
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 7.3e-208 727.6 610 61.1
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 9.6e-208 727.2 581 69.9
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-206 723.4 594 62.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.4e-206 722.6 608 60.9
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.2e-205 720.3 582 70.8
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 2.9e-204 715.7 600 64.8
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 7.1e-203 711.1 598 67.4
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.2e-202 710.3 593 68.8
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.2e-202 710.3 612 60.1
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.7e-202 709.1 597 65.2
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 4.6e-202 708.4 586 61.4
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 4.6e-202 708.4 618 63.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 7.9e-202 707.6 618 63.1
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.3e-201 706.8 593 64.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.8e-201 706.4 596 65.3
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 2.3e-201 706.1 609 65.5
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.3e-201 706.1 624 61.1
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 5.1e-201 704.9 593 64.1
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.5e-200 703.4 604 63.9
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.5e-200 702.6 579 64.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 7.4e-200 701.0 584 64.7
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.1e-199 699.5 612 60.1
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 2.8e-199 699.1 618 64.7
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.8e-199 698.4 615 64.7
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 4.8e-199 698.4 610 62.5
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.8e-198 696.4 606 60.9
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 6.9e-198 694.5 604 60.4
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 6.9e-198 694.5 604 60.4
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.9e-198 694.5 559 68.2
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 9.0e-198 694.1 584 62.5
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.2e-197 693.7 620 60.3
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.5e-197 693.3 607 60.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.0e-197 693.0 616 60.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 2.0e-197 693.0 607 62.6
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 5.8e-197 691.4 612 59.8
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 7.6e-197 691.0 589 62.3
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.0e-196 690.6 530 68.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 1.3e-196 690.3 615 65.0
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 3.8e-196 688.7 607 61.8
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 4.9e-196 688.3 609 62.6
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 6.5e-196 688.0 552 64.9
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 6.5e-196 688.0 601 61.2
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 8.4e-196 687.6 606 61.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 8.4e-196 687.6 607 61.9
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 4.2e-195 685.3 603 60.7
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.7e-194 682.6 591 64.3
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 4.6e-194 681.8 550 65.3
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-193 680.6 555 63.6
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 2.3e-193 679.5 596 60.1
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 3.0e-193 679.1 612 60.5
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 8.7e-193 677.6 586 60.2
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.3e-192 675.6 617 61.1
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.3e-192 675.6 598 59.9
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.3e-191 673.7 616 61.2
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.8e-191 672.5 560 64.3
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.5e-189 666.8 595 59.7
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 3.8e-188 662.1 532 64.7
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 8.4e-188 661.0 623 57.9
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.1e-187 660.6 605 57.9
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 4.6e-186 655.2 578 58.3
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 3.0e-185 652.5 616 61.9
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.5e-184 649.4 544 65.6
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.3e-184 648.7 590 58.3
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.4e-179 633.6 605 56.0
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.1e-174 615.9 531 58.4
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.5e-173 613.6 469 65.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 7.4e-168 594.7 606 52.5
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.8e-167 592.0 593 52.8
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.6e-165 586.3 582 56.4
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.8e-164 582.4 616 52.3
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 7.2e-163 578.2 411 69.6
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 4.7e-162 575.5 540 55.4
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 3.0e-161 572.8 620 52.7
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 8.8e-145 518.1 525 51.8
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 7.0e-142 508.4 481 56.8
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.7e-141 506.5 370 65.4
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.9e-139 500.4 534 51.5
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.2e-129 465.7 416 65.6
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.1e-114 417.2 337 67.7
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 2.0e-104 384.0 340 62.6
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 7.6e-80 302.4 520 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 3.7e-50 203.8 450 35.8
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.3e-47 195.3 538 35.7
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.7e-42 178.3 277 36.8
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 8.2e-42 176.0 279 36.9
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 5.0e-39 166.8 241 33.6
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.0e-36 159.1 173 52.0
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.9e-32 143.3 91 70.3
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 2.1e-29 134.8 75 81.3
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.0e-28 132.5 79 77.2
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.3e-26 123.2 83 72.3
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.5e-24 117.5 80 67.5
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.7e-21 107.1 117 57.3
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 8.0e-21 106.3 58 75.9
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 8.6e-15 86.3 162 30.2
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.5e-06 58.2 30 86.7
FvH4_4g05840 Fragaria vesca HOM05D005043 ORTHO05D006182 3.3e-06 57.8 47 53.2


User provided reference genes

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