Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G105600 Theobroma cacao HOM05D008014 ORTHO05D009981 2.9e-171 605.1 305 100.0
Gohir.A13G148400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.3e-82 308.9 322 54.7
Gohir.D13G153000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.6e-81 305.8 326 54.0
COL.COLO4_30081 Corchorus olitorius HOM05D008014 ORTHO05D009981 9.9e-79 297.7 323 52.6
Duzib187G1296 Durio zibethinus HOM05D008014 ORTHO05D009981 3.2e-77 292.7 316 52.8
Gorai.013G172900 Gossypium raimondii HOM05D008014 ORTHO05D009981 8.7e-75 284.6 271 57.2
Duzib187G1720 Durio zibethinus HOM05D008014 ORTHO05D009981 9.0e-72 274.6 270 55.9
Duzib187G1989 Durio zibethinus HOM05D008014 ORTHO05D009981 9.0e-72 274.6 270 55.9
Duzib187G0568 Durio zibethinus HOM05D008014 ORTHO05D009981 2.9e-70 269.6 274 55.1
Duzib187G1128 Durio zibethinus HOM05D008014 ORTHO05D009981 1.7e-62 243.8 204 62.3
Duzib213G0359 Durio zibethinus HOM05D008014 ORTHO05D009981 5.5e-53 212.2 286 46.9
Duzib213G1088 Durio zibethinus HOM05D008014 ORTHO05D009981 5.5e-53 212.2 286 45.1
Thecc.07G106000 Theobroma cacao HOM05D008014 ORTHO05D009981 2.3e-51 206.8 284 46.1
Gohir.A01G057400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.4e-48 197.6 267 43.4
Gorai.002G063000 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.8e-46 189.5 283 40.6
Gohir.D01G043800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 7.2e-45 185.3 302 39.7
Gohir.A01G057600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.6e-44 184.1 267 41.2
Gorai.009G369400 Gossypium raimondii HOM05D008014 ORTHO05D009981 4.3e-42 176.0 284 37.7
Gohir.D05G342800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.8e-41 173.3 284 37.3
Gohir.D01G044000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.1e-40 171.4 272 38.2
Gorai.002G063200 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.4e-40 171.0 272 38.2
Gorai.009G369100 Gossypium raimondii HOM05D008014 ORTHO05D009981 6.9e-40 168.7 182 47.8
Gohir.D05G342750 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.4e-39 166.4 181 47.5
Gohir.A04G040200 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.5e-39 166.0 205 46.3
Gohir.A04G040100 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.9e-39 165.6 257 40.5
COL.COLO4_30083 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.0e-38 164.9 211 46.9
Gohir.A01G057332 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.5e-37 160.2 181 46.4
Gorai.009G371800 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.5e-37 160.2 203 44.8
Gorai.009G369600 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.2e-37 159.8 257 38.9
Gohir.D05G343433 Gossypium hirsutum HOM05D008014 ORTHO05D009981 7.2e-37 158.7 300 36.3
Gohir.D01G043732 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.4e-35 154.5 181 44.8
Gorai.002G062900 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.4e-35 154.5 181 44.8
Gorai.009G369900 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.7e-33 147.5 251 37.5
Gohir.A04G040400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.8e-33 146.7 182 46.2
Thecc.09G297300 Theobroma cacao HOM05D008014 ORTHO05D009981 1.1e-29 134.8 219 37.9
Thecc.03G303400 Theobroma cacao HOM05D008014 ORTHO05D009981 1.4e-29 134.4 188 41.5
Gorai.004G189300 Gossypium raimondii HOM05D013541 ORTHO05D009981 4.2e-29 132.9 175 44.0
Gohir.D08G180600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.2e-28 131.3 181 42.0
Gohir.A08G160100 Gossypium hirsutum HOM05D013541 ORTHO05D009981 1.6e-28 131.0 206 38.3
Gohir.A08G160200 Gossypium hirsutum HOM05D013541 ORTHO05D009981 1.6e-28 131.0 206 38.3
Thecc.03G304500 Theobroma cacao HOM05D008014 ORTHO05D009981 2.1e-28 130.6 184 40.8
Thecc.03G305000 Theobroma cacao HOM05D008014 ORTHO05D009981 2.1e-28 130.6 184 40.8
Thecc.04G233100 Theobroma cacao HOM05D021021 ORTHO05D022794 2.7e-28 130.2 179 39.1
Thecc.03G303700 Theobroma cacao HOM05D008014 ORTHO05D009981 4.7e-28 129.4 185 43.2
Thecc.09G297200 Theobroma cacao HOM05D008014 ORTHO05D009981 3.0e-27 126.7 191 40.3
Duzib170G0545 Durio zibethinus HOM05D008014 ORTHO05D009981 3.9e-27 126.3 167 40.7
Gorai.004G189100 Gossypium raimondii HOM05D008014 ORTHO05D009981 5.2e-27 125.9 181 40.3
Gorai.002G063100 Gossypium raimondii HOM05D008014 ORTHO05D047837 1.5e-26 124.4 182 42.3
Gohir.A01G057500 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.0e-26 124.0 182 42.3
Gohir.D01G043900 Gossypium hirsutum HOM05D008014 ORTHO05D047837 3.3e-26 123.2 224 38.4
Duzib205G1694 Durio zibethinus HOM05D008014 ORTHO05D009981 5.7e-26 122.5 193 37.8
Gohir.D08G180500 Gossypium hirsutum HOM05D013541 ORTHO05D009981 5.7e-26 122.5 181 39.8
COL.COLO4_10756 Corchorus olitorius HOM05D008014 ORTHO05D009981 2.8e-25 120.2 189 40.7
COL.COLO4_10755 Corchorus olitorius HOM05D008014 ORTHO05D009981 4.8e-25 119.4 183 39.9
Thecc.03G303500 Theobroma cacao HOM05D008014 ORTHO05D009981 4.1e-24 116.3 245 34.7
Thecc.09G297600 Theobroma cacao HOM05D008014 ORTHO05D009981 4.1e-24 116.3 267 31.8
COL.COLO4_17130 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.6e-23 114.4 206 37.9
Duzib208G0001 Durio zibethinus HOM05D008014 ORTHO05D009981 2.6e-23 113.6 75 73.3
Thecc.09G297500 Theobroma cacao HOM05D008014 ORTHO05D009981 3.5e-23 113.2 147 42.2
Gohir.D08G180550 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.9e-23 112.5 134 43.3
Duzib168G0242 Durio zibethinus HOM05D008014 ORTHO05D009981 3.8e-22 109.8 264 31.1
Gorai.004G189200 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.8e-22 109.8 123 46.3
Duzib213G0842 Durio zibethinus HOM05D008014 ORTHO05D009981 3.2e-21 106.7 156 42.9
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 6.1e-20 102.4 202 31.7
Gohir.D02G039200 Gossypium hirsutum HOM05D021021 ORTHO05D022794 2.6e-18 97.1 229 27.9
Duzib205G1222 Durio zibethinus HOM05D008014 ORTHO05D009981 3.3e-18 96.7 248 31.0
Gorai.005G043400 Gossypium raimondii HOM05D021021 ORTHO05D022794 7.5e-18 95.5 229 27.9
Gohir.A02G032500 Gossypium hirsutum HOM05D021021 ORTHO05D022794 4.8e-17 92.8 227 27.8
Gorai.005G043300 Gossypium raimondii HOM05D021021 ORTHO05D022794 1.4e-16 91.3 167 31.7
Gohir.A05G086400 Gossypium hirsutum HOM05D041197 ORTHO05D036119 1.8e-16 90.9 197 29.9
Gorai.004G189400 Gossypium raimondii HOM05D008014 ORTHO05D009981 9.1e-16 88.6 178 34.3
Gohir.D08G180666 Gossypium hirsutum HOM05D010401 ORTHO05D012682 6.5e-14 82.4 173 32.4
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 1.5e-13 81.3 159 27.7
Gorai.004G189500 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.6e-12 77.8 174 31.6
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 8.0e-12 75.5 179 23.5
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 2.3e-11 73.9 174 27.6
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 1.2e-10 71.6 142 26.1
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 5.7e-10 69.3 195 23.6
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.3e-09 68.2 154 26.6
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 1.3e-09 68.2 113 27.4
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 1.7e-09 67.8 155 26.5
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 1.7e-09 67.8 155 26.5
QL08p054674 Quercus lobata HOM05D030634 ORTHO05D337832 2.2e-09 67.4 187 24.1
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 2.2e-09 67.4 163 25.2
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 2.2e-09 67.4 195 23.1
vmacro16255 Vaccinium macrocarpon HOM05D000045 ORTHO05D002701 2.2e-09 67.4 147 27.9
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.8e-09 67.0 151 27.2
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.7e-09 66.6 211 25.6
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 8.3e-09 65.5 186 25.8
QL02p010396 Quercus lobata HOM05D002010 ORTHO05D000502 1.1e-08 65.1 156 26.3
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 1.1e-08 65.1 167 21.6
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 1.4e-08 64.7 154 26.0
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.4e-08 63.9 266 24.1
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 3.1e-08 63.5 172 25.0
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 4.1e-08 63.2 154 24.0
QL04p064555 Quercus lobata HOM05D000054 ORTHO05D000286 7.0e-08 62.4 192 25.5
COL.COLO4_07602 Corchorus olitorius HOM05D031588 ORTHO05D009981 9.1e-08 62.0 114 26.3
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 9.1e-08 62.0 161 25.5
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 2.7e-07 60.5 106 28.3
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 3.5e-07 60.1 96 31.2
COL.COLO4_36825 Corchorus olitorius HOM05D008014 ORTHO05D009981 4.5e-07 59.7 134 27.6
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 5.9e-07 59.3 181 23.2
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 5.9e-07 59.3 129 27.1
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 7.7e-07 58.9 111 27.0
FvH4_3g40630 Fragaria vesca HOM05D007040 ORTHO05D012106 1.3e-06 58.2 135 30.4
FAN11G0258 Fragaria x ananassa HOM05D007040 ORTHO05D012106 1.3e-06 58.2 135 30.4
COL.COLO4_24337 Corchorus olitorius HOM05D009011 ORTHO05D009981 1.7e-06 57.8 215 26.5
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.7e-06 57.8 96 29.2
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.9e-06 57.0 138 26.1
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 2.9e-06 57.0 122 27.0
QL03p017343 Quercus lobata HOM05D000005 ORTHO05D000012 3.8e-06 56.6 146 19.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 3.8e-06 56.6 54 40.7
COL.COLO4_29752 Corchorus olitorius HOM05D009011 ORTHO05D013312 6.5e-06 55.8 178 28.1
FAN25G2376 Fragaria x ananassa HOM05D007040 ORTHO05D012106 6.5e-06 55.8 128 30.5
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 8.6e-06 55.5 106 24.5


User provided reference genes

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