Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.4e-221 772.7 393 100.0
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.3e-160 569.3 443 72.5
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 7.8e-145 517.7 443 66.4
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 1.9e-143 513.1 454 68.7
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.3e-136 489.6 444 63.5
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 9.0e-133 477.6 435 63.9
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.9e-130 469.9 437 63.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 7.4e-111 404.8 415 58.3
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.2e-106 389.0 409 57.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 4.2e-98 362.5 432 55.3
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 2.0e-92 343.6 417 52.0
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.1e-90 337.8 453 49.0
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 6.3e-86 322.0 458 45.2
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 2.9e-75 286.6 421 48.9
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.1e-73 278.9 435 46.9
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.3e-72 276.9 436 47.0
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.0e-72 276.2 441 45.8
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.0e-72 276.2 426 48.6
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 1.3e-70 271.2 438 45.2
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 2.8e-70 270.0 457 46.6
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 6.3e-70 268.9 404 46.8
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.1e-69 268.1 441 45.6
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.1e-69 268.1 435 43.9
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 5.4e-69 265.8 397 44.8
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.6e-68 264.2 305 53.4
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.5e-68 263.1 454 43.6
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.0e-67 261.5 389 47.6
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 2.9e-67 260.0 437 41.9
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.9e-66 257.3 430 45.6
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.2e-65 254.6 451 42.1
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 6.1e-65 252.3 457 42.2
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.2e-63 248.1 459 42.5
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.0e-63 247.3 390 45.6
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.6e-63 246.9 460 41.7
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.5e-63 245.4 458 42.6
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 9.2e-61 238.4 436 44.7
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.2e-60 238.0 453 42.8
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.0e-59 235.0 368 45.1
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 9.5e-58 228.4 460 41.1
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.8e-57 226.9 436 41.7
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.8e-56 224.2 291 52.2
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.2e-54 217.2 412 42.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.4e-53 214.5 431 38.5
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.4e-53 213.8 257 52.9
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 9.2e-53 211.8 421 43.7
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 3.5e-52 209.9 460 40.9
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 3.5e-52 209.9 441 38.5
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 7.8e-52 208.8 456 39.3
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 7.8e-52 208.8 434 38.0
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.9e-50 204.1 453 38.6
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 2.5e-50 203.8 313 48.2
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.2e-49 201.4 456 37.5
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.6e-49 199.9 461 38.8
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.4e-48 198.0 454 38.8
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.0e-48 196.4 443 41.1
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 6.8e-48 195.7 442 38.2
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.2e-47 194.9 423 37.6
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.5e-47 194.5 444 38.7
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 2.6e-47 193.7 445 37.5
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 5.8e-47 192.6 429 39.6
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 7.5e-47 192.2 446 36.5
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.3e-46 191.4 449 36.5
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.9e-46 189.5 401 41.1
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 8.3e-46 188.7 230 53.5
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 1.1e-45 188.3 447 39.8
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.6e-44 184.5 411 36.5
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.6e-44 184.5 424 38.2
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 2.1e-44 184.1 454 35.7
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 6.6e-43 179.1 453 35.8
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.5e-42 177.2 448 36.4
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 3.3e-42 176.8 403 39.0
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 5.6e-42 176.0 445 36.9
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 5.6e-42 176.0 387 37.7
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 2.1e-41 174.1 461 35.4
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 2.1e-41 174.1 253 47.8
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 2.8e-41 173.7 402 38.8
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.8e-41 173.7 448 33.7
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 6.2e-41 172.6 348 39.9
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 6.2e-41 172.6 427 39.8
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 8.1e-41 172.2 418 39.0
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.2e-39 168.3 400 36.0
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.5e-39 167.9 450 36.4
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.5e-39 167.9 466 33.9
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.4e-39 166.4 461 34.5
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.9e-38 162.9 437 34.6
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.9e-38 162.9 416 37.5
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 4.1e-37 159.8 435 34.3
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 5.4e-37 159.5 372 36.3
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 7.1e-37 159.1 435 36.6
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.6e-36 157.9 423 34.8
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 4.6e-36 156.4 457 36.1
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.1e-35 152.9 382 37.4
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 8.7e-35 152.1 441 35.4
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.9e-34 151.0 414 35.0
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 2.5e-34 150.6 392 37.5
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 5.6e-34 149.4 299 38.1
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 5.6e-34 149.4 384 38.5
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.1e-33 147.5 418 34.4
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 8.1e-33 145.6 292 40.4
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 8.1e-33 145.6 445 35.7
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 3.1e-32 143.7 397 36.5
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.9e-32 142.5 380 34.5
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 9.0e-32 142.1 396 35.6
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.7e-28 130.6 263 41.8
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-27 128.3 459 32.0
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 3.0e-27 127.1 444 32.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 3.9e-27 126.7 321 37.1
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 6.6e-27 125.9 151 53.0
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 3.3e-26 123.6 229 42.8
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 5.6e-26 122.9 298 33.6
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 1.6e-25 121.3 377 32.9
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 2.1e-25 120.9 410 32.9
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 6.2e-25 119.4 428 31.1
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 5.3e-24 116.3 377 34.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 5.8e-23 112.8 446 29.6
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.8e-22 110.2 306 32.7
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 4.9e-22 109.8 417 33.1
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 2.4e-21 107.5 523 25.8
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 2.7e-20 104.0 419 30.3
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 4.6e-20 103.2 313 34.5
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.1e-18 98.6 216 37.5
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 2.5e-18 97.4 419 29.6
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.3e-18 97.1 315 34.6
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 9.6e-18 95.5 315 34.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 1.6e-17 94.7 229 41.9
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 6.2e-17 92.8 439 30.1
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 8.1e-17 92.4 214 37.4
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.6e-15 87.4 436 25.9
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.4e-13 81.6 406 27.8
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 4.6e-12 76.6 324 29.9
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 1.8e-11 74.7 451 27.9
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 6.7e-11 72.8 310 27.4
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.1e-10 72.0 325 30.2
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 1.5e-10 71.6 277 29.2
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 2.5e-10 70.9 277 29.6
Cpa.g.sc7.22 Carica papaya HOM05D013066 ORTHO05D010890 7.4e-10 69.3 383 25.3
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 2.8e-09 67.4 476 26.5
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 1.1e-08 65.5 325 29.2
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 1.4e-08 65.1 193 34.7
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 4.0e-08 63.5 188 32.4
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 5.3e-08 63.2 122 37.7
Thhalv10016947m.g Eutrema salsugineum HOM05D009294 ORTHO05D011427 2.0e-07 61.2 217 36.4
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.6e-07 60.8 268 27.2
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 2.6e-07 60.8 268 27.2
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 2.6e-07 60.8 430 24.7
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 1.0e-06 58.9 438 26.7
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 2.9e-06 57.4 454 25.8
Zm00001eb338380 Zea mays HOM05D041388 ORTHO05D037239 2.9e-06 57.4 395 26.1
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 3.8e-06 57.0 185 30.3
SEGI_31349 Sequoiadendron giganteum HOM05D016559 ORTHO05D006345 3.8e-06 57.0 219 32.9


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