Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 0.0e+00 1179.1 743 100.0
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 7.1e-264 914.1 781 79.3
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.3e-262 909.8 781 78.4
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.5e-261 906.4 779 77.5
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 8.8e-222 774.2 749 71.8
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.8e-182 643.7 779 54.2
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 4.6e-178 629.0 778 55.4
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 3.9e-177 625.9 733 58.0
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 8.6e-177 624.8 787 56.3
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 2.5e-176 623.2 838 53.0
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 4.0e-174 615.9 678 56.0
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.3e-164 584.3 749 56.2
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.8e-164 582.8 761 54.7
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 8.4e-164 581.6 739 54.4
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 8.6e-161 571.6 543 65.0
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 8.6e-161 571.6 707 56.7
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.4e-157 559.7 728 52.3
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 9.9e-157 558.1 543 59.3
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.8e-154 548.5 738 51.8
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 6.6e-153 545.4 756 53.2
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.5e-152 543.5 811 49.2
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.6e-151 540.8 810 47.3
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 2.4e-150 537.0 782 52.4
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.4e-147 527.7 740 49.7
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 1.9e-147 527.3 796 46.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 2.1e-146 523.9 744 46.4
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 4.6e-146 522.7 767 49.3
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.0e-146 522.3 812 46.9
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.0e-145 521.5 803 46.1
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.3e-145 521.2 739 47.0
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 3.0e-145 520.0 780 45.5
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 8.7e-145 518.5 804 45.1
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.4e-142 511.1 729 49.4
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.0e-142 508.4 730 49.2
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 2.9e-140 503.4 543 54.7
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.2e-138 498.0 724 47.4
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.3e-137 493.8 787 44.3
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 3.3e-136 490.0 794 46.6
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 7.4e-136 488.8 750 45.3
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 9.6e-136 488.4 728 44.8
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 1.3e-135 488.0 724 44.9
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.1e-134 485.0 731 45.6
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.3e-132 478.0 718 44.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.3e-132 478.0 762 49.1
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 2.9e-132 476.9 742 51.6
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 6.0e-130 469.2 735 41.5
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 7.9e-130 468.8 798 41.5
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.8e-129 467.6 789 41.3
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 9.7e-128 461.8 753 47.4
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 3.7e-127 459.9 734 44.4
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 4.8e-127 459.5 721 44.9
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 4.8e-127 459.5 801 41.1
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 6.9e-126 455.7 730 46.8
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 9.0e-126 455.3 734 51.1
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.5e-123 447.2 531 50.5
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 3.3e-120 436.8 737 44.1
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 6.3e-119 432.6 739 44.4
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 8.2e-119 432.2 772 39.2
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 8.2e-119 432.2 778 39.6
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.1e-118 431.8 768 40.4
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 2.4e-118 430.6 732 43.3
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 4.1e-118 429.9 733 44.2
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 4.5e-117 426.4 731 42.1
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 5.9e-117 426.0 723 44.4
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.3e-116 424.9 730 42.1
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.3e-116 424.9 730 42.1
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 7.9e-114 415.6 724 43.9
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 7.4e-112 409.1 458 57.2
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.3e-111 408.3 797 43.9
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 2.2e-111 407.5 568 50.4
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.2e-111 407.5 818 37.2
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.0e-108 398.7 490 46.9
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.0e-105 388.7 395 56.5
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 6.7e-105 386.0 477 48.8
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 7.4e-104 382.5 777 41.3
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.9e-99 367.9 419 52.5
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.7e-95 353.6 570 44.0
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.1e-83 315.5 441 46.0
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 4.2e-83 313.5 756 39.0
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 4.2e-83 313.5 733 39.6
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.3e-75 287.3 262 65.3
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 5.2e-73 280.0 388 48.7
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.2e-72 278.9 600 35.7
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.1e-67 262.3 766 32.4
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 3.2e-62 244.2 524 35.3
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 7.3e-59 233.0 543 32.8
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 3.6e-58 230.7 513 39.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.7e-58 230.3 482 36.3
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 5.1e-52 210.3 302 46.4
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 9.2e-46 189.5 548 27.7
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 3.0e-36 157.9 180 52.8
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.4e-27 126.7 126 54.8
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.1e-26 125.2 747 27.6
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.4e-23 113.2 202 44.6
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.6e-21 109.0 115 54.8
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.3e-18 99.4 79 73.4
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.9e-17 93.6 320 30.0
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 8.4e-15 86.7 129 41.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.1e-14 83.6 76 57.9
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 8.2e-10 70.1 87 43.7
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.1e-09 69.7 87 42.5
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 2.4e-09 68.6 87 42.5
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.3e-07 62.8 70 44.3


User provided reference genes

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