Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 7.2e-78 293.9 153 100.0
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 4.5e-48 194.9 152 72.4
Gohir.D13G148800 Gossypium hirsutum HOM05D001272 ORTHO05D001843 4.9e-42 174.9 166 60.8
Gorai.013G166500 Gossypium raimondii HOM05D001272 ORTHO05D001843 2.3e-39 166.0 166 58.4
Gohir.A13G144000 Gossypium hirsutum HOM05D001272 ORTHO05D001843 2.9e-34 149.1 138 59.4
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 2.4e-17 92.8 173 41.6
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 8.6e-15 84.3 125 41.6
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 2.5e-14 82.8 169 39.6
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.2e-13 80.5 166 37.3
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 2.8e-13 79.3 139 36.0
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 1.5e-11 73.6 124 36.3
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 1.5e-11 73.6 99 45.5
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.5e-11 73.6 172 34.9
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.4e-11 72.4 140 31.4
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 9.9e-11 70.9 146 34.2
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 9.9e-11 70.9 138 35.5
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 2.2e-10 69.7 164 38.4
Rhsim04G0017600 Rhododendron simsii HOM05D008666 ORTHO05D009871 8.4e-10 67.8 142 37.3
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 1.4e-09 67.0 169 36.7
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 3.2e-09 65.9 102 32.4
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 5.4e-09 65.1 118 37.3
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 7.1e-09 64.7 131 33.6
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 7.1e-09 64.7 146 34.9
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 9.2e-09 64.3 158 33.5
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.1e-08 63.2 74 45.9
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 2.7e-08 62.8 139 28.8
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 3.5e-08 62.4 158 33.5
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 3.5e-08 62.4 158 33.5
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 3.5e-08 62.4 141 32.6
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 7.8e-08 61.2 214 29.9
RcHm_v2.0_Chr5g0035271 Rosa chinensis HOM05D010293 ORTHO05D009871 1.0e-07 60.8 88 43.2
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 3.9e-07 58.9 136 39.0
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 5.1e-07 58.5 93 41.9
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 8.6e-07 57.8 95 36.8
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 8.6e-07 57.8 120 31.7
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 1.1e-06 57.4 122 35.2
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 2.5e-06 56.2 116 31.0
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 3.3e-06 55.8 89 32.6
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 7.3e-06 54.7 119 31.1
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 9.6e-06 54.3 124 31.5


User provided reference genes

Program Settings