Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G062700 Theobroma cacao HOM05D008244 ORTHO05D009402 1.9e-292 1008.4 502 100.0
Thecc.07G062400 Theobroma cacao HOM05D008244 ORTHO05D009402 2.0e-233 812.4 533 77.5
Thecc.07G041100 Theobroma cacao HOM05D008244 ORTHO05D009402 3.7e-216 755.0 534 73.0
Thecc.07G041300 Theobroma cacao HOM05D008244 ORTHO05D009402 1.8e-215 752.7 535 71.6
Thecc.07G062600 Theobroma cacao HOM05D008244 ORTHO05D009402 4.9e-99 365.9 244 78.3
Thecc.07G041400 Theobroma cacao HOM05D008244 ORTHO05D009402 4.3e-95 352.8 269 68.0
Thecc.07G040900 Theobroma cacao HOM05D008244 ORTHO05D009402 7.3e-95 352.1 269 68.0
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 4.0e-53 213.4 557 31.6
Zm00001eb060190 Zea mays HOM05D008244 ORTHO05D009402 9.9e-52 208.8 524 33.8
Thecc.07G062500 Theobroma cacao HOM05D008244 ORTHO05D009402 1.2e-49 201.8 128 79.7
Hma1.2p1_0305F.1_g119380 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 1.4e-45 188.3 537 30.2
TWI14G1100 Tripterygium wilfordii HOM05D008244 ORTHO05D009402 3.8e-43 180.3 545 32.1
DCAR_022572 Daucus carota HOM05D008244 ORTHO05D009402 5.9e-36 156.4 533 27.0
AUR62020324 Chenopodium quinoa HOM05D008244 ORTHO05D009402 1.3e-35 155.2 556 29.9
EL10Ac4g07678 Beta vulgaris HOM05D008244 ORTHO05D009402 7.2e-34 149.4 560 29.1
CANSAT64G2823 Cannabis sativa HOM05D008244 ORTHO05D009402 1.6e-33 148.3 578 28.2
Ah.04g166200 Amaranthus hybridus HOM05D008244 ORTHO05D009402 2.2e-27 127.9 423 29.8
Sabra17G0026000 Salix brachista HOM05D008244 ORTHO05D009402 2.6e-23 114.4 184 41.3
TAR636G0515 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.8e-22 110.2 259 34.7
Hma1.2p1_0642F.1_g194310 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 6.5e-19 99.8 187 36.9
Hma1.2p1_2166F.1_g315860 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 6.5e-19 99.8 187 36.9
TAR636G1905 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.6e-17 95.1 157 41.4
TAR633G2532 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.0e-16 92.4 264 33.0
TAR636G1541 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.0e-16 92.4 265 32.8
EL10Ac5g12367 Beta vulgaris HOM05D008899 ORTHO05D009402 2.3e-16 91.3 121 44.6
EL10Ac5g12352 Beta vulgaris HOM05D008899 ORTHO05D009402 3.0e-16 90.9 121 44.6
EL10Ac5g12351 Beta vulgaris HOM05D008899 ORTHO05D009402 3.9e-16 90.5 121 43.8
EL10Ac5g12354 Beta vulgaris HOM05D008899 ORTHO05D009402 6.7e-16 89.7 121 43.8
EL10Ac5g12370 Beta vulgaris HOM05D008899 ORTHO05D009402 6.7e-16 89.7 121 44.6
TAR636G3080 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.8e-16 89.4 188 36.2
Potri.017G011000 Populus trichocarpa HOM05D008244 ORTHO05D009402 1.5e-15 88.6 323 28.8
AUR62011480 Chenopodium quinoa HOM05D008899 ORTHO05D009402 9.7e-15 85.9 121 42.1
AUR62011484 Chenopodium quinoa HOM05D008899 ORTHO05D009402 9.7e-15 85.9 121 42.1
Hma1.2p1_0074F.1_g038655 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 9.7e-15 85.9 208 32.7
TAR636G0746 Trochodendron aralioides HOM05D008244 ORTHO05D009402 9.7e-15 85.9 260 30.0
TAR629G2654 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.3e-14 85.5 199 32.7
EL10Ac5g12368 Beta vulgaris HOM05D008899 ORTHO05D009402 1.4e-13 82.0 97 49.5
AUR62014028 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 82.0 121 39.7
AUR62014029 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 82.0 121 39.7
AUR62014030 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 82.0 121 39.7
AUR62014031 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 82.0 121 39.7
Ah.06g188270 Amaranthus hybridus HOM05D008244 ORTHO05D009402 3.1e-13 80.9 132 39.4
AUR62014026 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.1e-13 80.9 120 40.0
AUR62014032 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.1e-13 80.9 120 40.0
AUR62014027 Chenopodium quinoa HOM05D008899 ORTHO05D009402 4.1e-13 80.5 120 40.0
EL10Ac5g12371 Beta vulgaris HOM05D008899 ORTHO05D009402 1.2e-12 79.0 97 48.5
TAR362G0980 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.6e-12 78.6 195 31.8
EL10Ac5g12372 Beta vulgaris HOM05D008899 ORTHO05D009402 2.6e-12 77.8 97 47.4
AUR62014011 Chenopodium quinoa HOM05D008899 ORTHO05D009402 4.5e-12 77.0 122 37.7
AUR62011099 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62011101 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62011103 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62011104 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62011105 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62044543 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62044544 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
AUR62044693 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.7e-12 76.3 122 38.5
TAR636G1005 Trochodendron aralioides HOM05D008244 ORTHO05D009402 7.7e-12 76.3 200 32.5
TAR636G2088 Trochodendron aralioides HOM05D008244 ORTHO05D009402 7.7e-12 76.3 117 41.9
AUR62044694 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.7e-11 75.1 122 37.7
TAR362G0489 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.7e-11 75.1 176 33.5
TAR636G3117 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.9e-11 74.3 251 28.3
TAR629G3474 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.1e-10 72.4 169 34.3
TAR636G1019 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.9e-10 71.6 155 33.5
TAR636G0253 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.5e-10 71.2 118 37.3
AUR62044541 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.2e-10 70.9 118 38.1
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.2e-10 70.5 251 30.7
TAR636G1283 Trochodendron aralioides HOM05D000739 ORTHO05D009402 4.2e-10 70.5 147 34.0
AUR62044542 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.6e-09 68.6 97 42.3
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 2.7e-09 67.8 246 26.8
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 2.7e-09 67.8 220 28.6
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.6e-09 67.4 220 28.2
TAR636G0857 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.6e-09 67.4 177 32.2
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 8.0e-09 66.2 220 28.6
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 1.4e-08 65.5 256 26.2
TAR636G0384 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.4e-08 65.5 131 38.2
EL10Ac8g20097 Beta vulgaris HOM05D008899 ORTHO05D009402 1.8e-08 65.1 120 35.0
EL10Ac5g12373 Beta vulgaris HOM05D008899 ORTHO05D009402 2.3e-08 64.7 90 43.3
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 2.3e-08 64.7 246 26.0
TAR636G1851 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.0e-08 63.9 176 31.2
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.6e-07 61.2 249 24.1
EL10Ac8g20100 Beta vulgaris HOM05D008899 ORTHO05D009402 3.4e-07 60.8 125 35.2
AUR62011098 Chenopodium quinoa HOM05D008899 ORTHO05D009402 5.7e-07 60.1 123 35.0
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 9.7e-07 59.3 203 28.6
TAR636G0092 Trochodendron aralioides HOM05D008244 ORTHO05D009402 9.7e-07 59.3 149 30.9
TAR636G1524 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.3e-06 58.9 81 40.7
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 2.2e-06 58.2 214 27.1
AUR62022102 Chenopodium quinoa HOM05D000025 ORTHO05D021209 3.7e-06 57.4 148 31.1
AUR62011102 Chenopodium quinoa HOM05D008899 ORTHO05D009402 4.8e-06 57.0 122 33.6
TAR636G3396 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.3e-06 56.2 87 39.1


User provided reference genes

Program Settings