Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G062500 Theobroma cacao HOM05D008244 ORTHO05D009402 5.8e-89 330.9 167 100.0
Thecc.07G062400 Theobroma cacao HOM05D008244 ORTHO05D009402 8.7e-53 210.7 128 83.6
Thecc.07G062700 Theobroma cacao HOM05D008244 ORTHO05D009402 6.9e-50 201.1 128 79.7
Thecc.07G041300 Theobroma cacao HOM05D008244 ORTHO05D009402 1.2e-49 200.3 128 80.5
Thecc.07G041100 Theobroma cacao HOM05D008244 ORTHO05D009402 2.9e-48 195.7 128 78.1
Thecc.07G041400 Theobroma cacao HOM05D008244 ORTHO05D009402 7.1e-47 191.0 128 78.9
Thecc.07G040900 Theobroma cacao HOM05D008244 ORTHO05D009402 4.6e-46 188.3 128 78.1
Zm00001eb060190 Zea mays HOM05D008244 ORTHO05D009402 4.8e-19 98.6 135 47.4
EL10Ac5g12370 Beta vulgaris HOM05D008899 ORTHO05D009402 1.1e-18 97.4 123 48.8
EL10Ac5g12367 Beta vulgaris HOM05D008899 ORTHO05D009402 1.8e-18 96.7 121 50.4
EL10Ac5g12351 Beta vulgaris HOM05D008899 ORTHO05D009402 2.0e-17 93.2 121 48.8
EL10Ac5g12352 Beta vulgaris HOM05D008899 ORTHO05D009402 2.6e-17 92.8 119 48.7
TAR636G0515 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.6e-17 92.8 129 46.5
EL10Ac5g12354 Beta vulgaris HOM05D008899 ORTHO05D009402 5.9e-17 91.7 121 47.9
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 1.3e-16 90.5 132 43.9
EL10Ac5g12368 Beta vulgaris HOM05D008899 ORTHO05D009402 2.2e-16 89.7 97 55.7
AUR62011480 Chenopodium quinoa HOM05D008899 ORTHO05D009402 8.5e-16 87.8 121 45.5
AUR62011484 Chenopodium quinoa HOM05D008899 ORTHO05D009402 8.5e-16 87.8 121 45.5
EL10Ac5g12371 Beta vulgaris HOM05D008899 ORTHO05D009402 1.1e-15 87.4 97 53.6
EL10Ac5g12372 Beta vulgaris HOM05D008899 ORTHO05D009402 1.1e-15 87.4 97 53.6
TAR636G3080 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.6e-14 83.6 131 43.5
AUR62014028 Chenopodium quinoa HOM05D008899 ORTHO05D009402 6.1e-14 81.6 128 40.6
AUR62014029 Chenopodium quinoa HOM05D008899 ORTHO05D009402 6.1e-14 81.6 128 40.6
AUR62014030 Chenopodium quinoa HOM05D008899 ORTHO05D009402 6.1e-14 81.6 128 40.6
AUR62014031 Chenopodium quinoa HOM05D008899 ORTHO05D009402 6.1e-14 81.6 128 40.6
AUR62014026 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 80.5 119 42.0
AUR62014032 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.4e-13 80.5 119 42.0
Sabra17G0026000 Salix brachista HOM05D008244 ORTHO05D009402 1.4e-13 80.5 124 42.7
TAR636G1905 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.4e-13 80.5 102 47.1
AUR62014027 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.8e-13 80.1 119 42.0
AUR62011099 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62011101 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62011103 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62011104 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62011105 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62044543 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62044544 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62044693 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.0e-13 79.3 122 42.6
TWI14G1100 Tripterygium wilfordii HOM05D008244 ORTHO05D009402 3.0e-13 79.3 122 42.6
AUR62044694 Chenopodium quinoa HOM05D008899 ORTHO05D009402 6.7e-13 78.2 122 41.8
AUR62014011 Chenopodium quinoa HOM05D008899 ORTHO05D009402 8.8e-13 77.8 122 40.2
TAR636G0253 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.5e-12 77.0 117 44.4
Ah.06g188270 Amaranthus hybridus HOM05D008244 ORTHO05D009402 2.0e-12 76.6 140 40.0
Hma1.2p1_0305F.1_g119380 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 2.0e-12 76.6 132 41.7
AUR62044541 Chenopodium quinoa HOM05D008899 ORTHO05D009402 4.4e-12 75.5 118 41.5
EL10Ac5g12373 Beta vulgaris HOM05D008899 ORTHO05D009402 1.3e-11 73.9 90 50.0
TAR633G2532 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.3e-11 73.9 129 40.3
TAR636G1541 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.8e-11 72.8 129 40.3
AUR62044542 Chenopodium quinoa HOM05D008899 ORTHO05D009402 3.7e-11 72.4 97 45.4
Hma1.2p1_0074F.1_g038655 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 3.7e-11 72.4 130 38.5
TAR362G0489 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.8e-11 72.0 122 41.0
TAR629G2654 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.8e-11 72.0 141 37.6
TAR636G0384 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.8e-11 72.0 131 41.2
TAR636G2088 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.8e-11 72.0 93 44.1
AUR62020324 Chenopodium quinoa HOM05D008244 ORTHO05D009402 6.3e-11 71.6 135 36.3
Ah.04g166200 Amaranthus hybridus HOM05D008244 ORTHO05D009402 8.2e-11 71.2 132 37.1
EL10Ac4g07678 Beta vulgaris HOM05D008244 ORTHO05D009402 1.4e-10 70.5 136 36.8
Hma1.2p1_0642F.1_g194310 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 4.1e-10 68.9 131 35.9
Hma1.2p1_2166F.1_g315860 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 4.1e-10 68.9 131 35.9
TAR636G0746 Trochodendron aralioides HOM05D008244 ORTHO05D009402 5.3e-10 68.6 129 38.8
TAR636G3396 Trochodendron aralioides HOM05D008244 ORTHO05D009402 5.3e-10 68.6 87 48.3
Hma1.2p1_0305F.1_g119680 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 3.5e-09 65.9 134 36.6
DCAR_022572 Daucus carota HOM05D008244 ORTHO05D009402 5.9e-09 65.1 134 33.6
TAR362G0980 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.2e-08 63.2 132 36.4
Hma1.2p1_1178F.1_g264420 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 3.8e-08 62.4 136 36.0
EL10Ac8g20097 Beta vulgaris HOM05D008899 ORTHO05D009402 5.0e-08 62.0 120 36.7
TAR636G1524 Trochodendron aralioides HOM05D008244 ORTHO05D009402 5.0e-08 62.0 80 41.2
Hma1.2p1_0305F.1_g119690 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 8.5e-08 61.2 125 37.6
TAR629G3474 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.5e-08 61.2 113 39.8
TAR636G1005 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.1e-07 60.8 114 40.4
TAR636G3091 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.1e-07 60.8 128 37.5
EL10Ac8g20100 Beta vulgaris HOM05D008899 ORTHO05D009402 3.2e-07 59.3 124 36.3
TAR636G1851 Trochodendron aralioides HOM05D008244 ORTHO05D009402 5.5e-07 58.5 105 38.1
AUR62011098 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.2e-07 58.2 119 37.8
AUR62011102 Chenopodium quinoa HOM05D008899 ORTHO05D009402 7.2e-07 58.2 122 37.7
TAR636G0857 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.6e-06 55.8 112 35.7
Hma1.2p1_0305F.1_g119700 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 6.1e-06 55.1 141 32.6
Hma1.2p1_0578F.1_g182370 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 6.1e-06 55.1 141 32.6


User provided reference genes

Program Settings