Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G059900 Theobroma cacao HOM05D000013 ORTHO05D037490 3.7e-21 104.0 54 100.0
Thecc.07G079600 Theobroma cacao HOM05D000013 ORTHO05D000011 4.5e-11 70.5 53 67.9
Thecc.07G079300 Theobroma cacao HOM05D000013 ORTHO05D000011 5.9e-11 70.1 53 69.8
Thecc.07G061000 Theobroma cacao HOM05D000013 ORTHO05D000011 3.9e-10 67.4 54 72.2
Thecc.07G079200 Theobroma cacao HOM05D000013 ORTHO05D000011 5.0e-10 67.0 53 66.0
Duzib213G0731 Durio zibethinus HOM05D000013 ORTHO05D000011 1.5e-09 65.5 53 64.2
COL.COLO4_09522 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.5e-09 64.7 53 62.3
Thecc.07G079400 Theobroma cacao HOM05D000013 ORTHO05D000011 5.6e-09 63.5 53 62.3
Gohir.D01G057966 Gossypium hirsutum HOM05D000013 ORTHO05D000011 2.8e-08 61.2 53 60.4
Duzib213G0724 Durio zibethinus HOM05D000013 ORTHO05D000011 3.6e-08 60.8 53 58.5
COL.COLO4_12236 Corchorus olitorius HOM05D000013 ORTHO05D000011 4.7e-08 60.5 52 59.6
Gohir.A01G071200 Gossypium hirsutum HOM05D000013 ORTHO05D000011 4.7e-08 60.5 53 62.3
COL.COLO4_09518 Corchorus olitorius HOM05D000013 ORTHO05D000011 1.0e-07 59.3 52 59.6
Duzib213G0346 Durio zibethinus HOM05D000013 ORTHO05D000011 1.0e-07 59.3 53 56.6
Gohir.D01G058000 Gossypium hirsutum HOM05D000013 ORTHO05D000011 1.0e-07 59.3 53 60.4
Potri.011G125351 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.8e-07 58.5 53 52.8
COL.COLO4_09516 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.3e-07 58.2 54 63.0
COL.COLO4_19438 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.3e-07 58.2 53 60.4
Gohir.A01G071000 Gossypium hirsutum HOM05D000013 ORTHO05D000011 2.3e-07 58.2 50 60.0
COL.COLO4_09524 Corchorus olitorius HOM05D000013 ORTHO05D000011 3.1e-07 57.8 52 63.5
Dinv22344 Davidia involucrata HOM05D000013 ORTHO05D000011 6.8e-07 56.6 53 54.7
Potri.001G414077 Populus trichocarpa HOM05D000013 ORTHO05D000011 8.9e-07 56.2 53 52.8
Sabra11G0114500 Salix brachista HOM05D000013 ORTHO05D037490 8.9e-07 56.2 53 54.7
Sabra11G0115200 Salix brachista HOM05D000013 ORTHO05D037490 8.9e-07 56.2 53 54.7
Thecc.07G079900 Theobroma cacao HOM05D000013 ORTHO05D000011 8.9e-07 56.2 53 56.6
Manes.03G119000 Manihot esculenta HOM05D000013 ORTHO05D000011 1.5e-06 55.5 54 55.6
Manes.15G080900 Manihot esculenta HOM05D000013 ORTHO05D000011 1.5e-06 55.5 53 49.1
Potri.011G125151 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.5e-06 55.5 54 53.7
Sabra11G0115400 Salix brachista HOM05D000013 ORTHO05D000011 1.5e-06 55.5 53 52.8
Sabra11G0115900 Salix brachista HOM05D000013 ORTHO05D000011 1.5e-06 55.5 53 52.8
Potri.001G414000 Populus trichocarpa HOM05D000013 ORTHO05D000011 2.0e-06 55.1 53 54.7
Sabra16G0273000 Salix brachista HOM05D000013 ORTHO05D000011 3.4e-06 54.3 53 52.8
Sabra16G0278100 Salix brachista HOM05D000013 ORTHO05D000011 3.4e-06 54.3 53 52.8
COL.COLO4_09514 Corchorus olitorius HOM05D000013 ORTHO05D000011 7.5e-06 53.1 53 54.7
Sabra16G0273600 Salix brachista HOM05D000013 ORTHO05D031609 7.5e-06 53.1 53 50.9
Thecc.07G064000 Theobroma cacao HOM05D000013 ORTHO05D000011 9.8e-06 52.8 53 50.9


User provided reference genes

Program Settings