Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G045500 Theobroma cacao HOM05D000051 ORTHO05D000015 7.5e-92 340.5 171 100.0
Thecc.07G045600 Theobroma cacao HOM05D000051 ORTHO05D000015 4.1e-50 201.8 159 69.2
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 8.4e-19 97.8 171 36.8
QL08p012538 Quercus lobata HOM05D000051 ORTHO05D000015 3.5e-17 92.4 159 39.0
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 2.5e-15 86.3 157 40.8
CSS0034448 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 5.7e-15 85.1 133 39.1
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-14 84.0 137 39.4
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 5.3e-13 78.6 136 36.8
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 1.0e-11 74.3 133 36.8
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 1.7e-11 73.6 135 36.3
Lj3g0004141 Lotus japonicus HOM05D000051 ORTHO05D000015 2.9e-11 72.8 131 42.7
Rhsim04G0037500 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.4e-10 70.5 142 31.7
RhsimUnG0013000 Rhododendron simsii HOM05D022656 ORTHO05D022449 7.1e-10 68.2 142 31.7
Duzib114G0289 Durio zibethinus HOM05D000051 ORTHO05D000015 9.3e-10 67.8 110 35.5
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 7.9e-09 64.7 144 31.9
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 2.3e-08 63.2 137 32.8
Ca_03848_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 8.7e-08 61.2 133 36.8
Medtr7g023310 Medicago truncatula HOM05D000051 ORTHO05D000015 8.7e-08 61.2 140 32.1
Psat7g161840 Pisum sativum HOM05D000218 ORTHO05D000125 1.5e-07 60.5 121 36.4
Rhsim04G0037400 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.5e-07 60.5 147 30.6
Medtr4g080787 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-07 60.1 133 33.8
TPR.G22358 Trifolium pratense HOM05D000051 ORTHO05D000015 1.9e-07 60.1 128 35.2
Rhsim04G0036700 Rhododendron simsii HOM05D000051 ORTHO05D000015 5.7e-07 58.5 136 31.6
RhsimUnG0013100 Rhododendron simsii HOM05D000051 ORTHO05D000015 9.7e-07 57.8 147 30.6
Medtr4g080773 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-06 57.4 133 33.1
QL05p074566 Quercus lobata HOM05D000051 ORTHO05D000015 1.6e-06 57.0 135 31.9
COL.COLO4_35721 Corchorus olitorius HOM05D000051 ORTHO05D000015 2.2e-06 56.6 170 28.2
COL.COLO4_04295 Corchorus olitorius HOM05D000051 ORTHO05D000015 4.8e-06 55.5 135 30.4
Duzib160G0642 Durio zibethinus HOM05D000051 ORTHO05D000015 4.8e-06 55.5 135 31.9
Duzib106G1005 Durio zibethinus HOM05D000051 ORTHO05D000015 6.3e-06 55.1 74 40.5


User provided reference genes

Program Settings