Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 6.2e-191 670.6 336 100.0
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.1e-123 447.2 338 71.9
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 6.5e-116 421.4 346 66.8
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.7e-114 416.0 346 66.5
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 4.4e-112 408.7 334 67.7
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.8e-98 362.8 277 71.1
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 2.3e-76 290.0 361 50.1
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 9.9e-72 274.6 359 44.8
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 6.4e-71 271.9 356 48.9
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.2e-69 267.7 353 47.9
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.3e-67 259.6 361 48.8
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 9.6e-67 258.1 355 48.5
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 6.2e-66 255.4 366 45.4
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 8.1e-66 255.0 361 47.4
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.1e-65 254.6 363 47.7
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 3.2e-62 243.0 359 46.0
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 5.4e-62 242.3 361 44.6
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 9.3e-62 241.5 370 44.9
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.1e-61 240.4 356 44.9
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.0e-60 236.5 356 44.1
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.9e-60 236.1 365 44.7
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.9e-60 236.1 365 44.7
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 5.1e-60 235.7 363 45.7
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.9e-59 233.8 356 44.1
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 7.3e-59 231.9 369 42.5
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 2.8e-58 229.9 357 44.5
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 2.4e-57 226.9 361 42.7
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 3.8e-55 219.5 357 44.3
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 6.4e-55 218.8 359 42.1
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.2e-54 216.5 392 40.1
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 9.3e-54 214.9 392 39.8
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.3e-52 211.1 360 42.5
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 2.5e-51 206.8 360 41.1
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.1e-49 201.4 348 40.5
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.4e-49 201.1 351 40.2
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 6.9e-49 198.7 351 40.5
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.2e-48 198.0 343 40.8
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.5e-48 197.6 346 41.0
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 2.0e-48 197.2 185 56.2
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 2.6e-48 196.8 366 41.0
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.3e-47 194.5 339 40.1
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.2e-46 189.5 357 40.9
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 9.3e-46 188.3 401 37.4
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 3.5e-45 186.4 233 48.1
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.5e-45 186.4 349 38.7
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 4.6e-45 186.0 327 38.2
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.3e-44 184.5 442 35.5
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.3e-44 183.7 348 40.5
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 2.3e-44 183.7 350 38.9
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.9e-44 183.0 357 38.7
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 6.7e-44 182.2 401 35.2
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 6.7e-44 182.2 348 40.2
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 8.7e-44 181.8 361 39.6
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.9e-43 180.6 353 38.8
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 5.7e-43 179.1 393 37.2
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.7e-43 179.1 375 35.5
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 9.6e-43 178.3 353 39.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 2.8e-42 176.8 356 38.5
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 2.8e-42 176.8 361 38.5
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 6.2e-42 175.6 494 31.8
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 6.2e-42 175.6 357 37.0
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.4e-41 174.5 358 38.8
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 4.0e-41 172.9 363 37.7
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.2e-40 171.4 395 36.2
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.6e-40 170.2 398 35.7
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 2.6e-40 170.2 355 41.7
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 3.4e-40 169.9 362 37.8
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.7e-39 167.5 414 33.1
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 3.8e-39 166.4 389 37.3
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 3.8e-39 166.4 358 38.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.1e-38 164.9 401 35.9
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.4e-38 164.5 344 38.7
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-37 161.0 366 38.8
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 3.5e-37 159.8 226 44.7
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 4.6e-37 159.5 346 36.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 6.1e-37 159.1 352 37.8
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.3e-36 157.1 282 40.4
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 2.3e-36 157.1 361 35.7
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 1.1e-35 154.8 425 32.5
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.5e-35 154.5 350 35.7
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 5.7e-35 152.5 348 38.2
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.6e-34 151.0 418 32.5
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.1e-33 148.3 445 31.7
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 3.1e-33 146.7 248 42.7
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 3.1e-33 146.7 245 38.8
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 6.9e-33 145.6 428 31.8
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.5e-32 144.4 447 30.9
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.0e-32 144.1 397 32.7
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 2.0e-32 144.1 348 37.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 4.5e-32 142.9 451 31.7
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.7e-31 141.0 362 35.6
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.2e-31 140.6 243 40.3
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 6.5e-31 139.0 376 33.5
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 8.5e-31 138.7 342 36.5
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 6.1e-29 132.5 381 31.8
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.5e-27 127.1 371 34.2
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 8.2e-26 122.1 531 29.0
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 8.2e-26 122.1 386 31.9
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.4e-25 121.3 308 32.8
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 3.1e-25 120.2 213 39.9
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.1e-22 111.7 459 27.9
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.1e-22 111.7 459 27.9
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 2.5e-22 110.5 462 27.7
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.2e-21 108.2 205 36.6
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.0e-20 105.1 461 27.8
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.1e-19 101.7 177 39.5
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.5e-16 91.3 365 29.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 7.7e-16 89.0 339 29.5
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 8.5e-15 85.5 275 29.8
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.5e-14 84.0 514 25.3
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 1.8e-09 67.8 344 27.9
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 5.3e-09 66.2 85 47.1
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.3e-07 61.6 374 26.5
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 9.4e-06 55.5 60 50.0


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