Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.8e-151 538.1 266 100.0
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 8.8e-124 447.2 272 84.2
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.7e-122 443.0 274 84.3
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.1e-121 438.7 276 82.6
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.9e-119 432.2 276 80.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 2.6e-115 419.1 268 81.7
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 4.1e-105 385.2 281 73.0
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 5.4e-105 384.8 280 70.4
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 4.5e-104 381.7 280 72.1
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 4.5e-104 381.7 220 84.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 2.9e-103 379.0 281 72.2
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 6.6e-103 377.9 279 72.8
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.5e-102 376.7 270 73.7
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 7.3e-102 374.4 220 83.6
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 2.8e-101 372.5 281 71.2
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 6.1e-101 371.3 280 70.7
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.0e-100 370.5 280 68.2
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 4.4e-99 365.2 224 80.4
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.1e-97 360.5 275 69.5
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.4e-97 360.1 279 68.5
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.4e-97 360.1 215 82.3
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 4.1e-97 358.6 276 68.5
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 5.4e-97 358.2 278 67.3
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 7.0e-97 357.8 228 77.6
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.6e-96 356.7 278 68.0
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.3e-95 353.6 228 75.0
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.7e-95 353.2 277 69.7
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.7e-95 353.2 203 86.7
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 3.0e-95 352.4 210 81.4
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 3.0e-95 352.4 200 85.5
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 3.9e-95 352.1 228 78.5
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.1e-94 350.5 200 85.0
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.5e-94 349.4 217 80.6
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.5e-94 349.4 279 67.0
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.5e-94 349.4 276 68.5
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 3.3e-94 349.0 241 72.2
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 3.3e-94 349.0 205 83.9
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.3e-94 348.6 281 68.0
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 5.6e-94 348.2 276 67.4
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 5.6e-94 348.2 205 82.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 9.5e-94 347.4 281 67.6
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.2e-93 347.1 271 69.0
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.6e-93 346.7 210 81.9
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.6e-93 346.7 235 72.8
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.6e-93 346.7 227 76.2
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.1e-93 346.3 217 78.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.1e-93 346.3 243 72.0
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 2.1e-93 346.3 206 83.0
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.8e-93 345.9 200 84.0
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.8e-93 345.9 215 80.9
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.6e-93 345.5 275 67.3
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 4.7e-93 345.1 237 73.0
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 6.2e-93 344.7 227 79.3
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 6.2e-93 344.7 205 82.4
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.0e-93 344.4 208 82.2
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.4e-92 343.6 212 82.1
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 4.0e-92 342.0 237 72.6
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 8.9e-92 340.9 302 62.3
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.9e-92 340.9 215 79.5
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.2e-91 340.5 221 77.8
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.5e-91 340.1 226 76.5
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 3.4e-91 339.0 207 78.7
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 5.8e-91 338.2 297 63.3
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.3e-90 337.0 205 81.5
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.9e-90 335.9 221 74.2
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.1e-89 334.0 275 65.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.4e-89 333.6 240 70.4
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.4e-89 332.8 236 70.8
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 4.1e-89 332.0 271 64.9
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 4.1e-89 332.0 279 65.6
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 7.0e-89 331.3 267 66.7
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 9.2e-89 330.9 222 74.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.2e-88 330.5 279 66.3
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.2e-88 330.5 231 72.7
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 1.6e-88 330.1 268 66.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 2.3e-87 326.2 202 79.7
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 2.3e-87 326.2 240 70.4
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 3.9e-87 325.5 196 81.6
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 8.6e-87 324.3 188 82.4
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.1e-86 323.9 277 63.9
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.1e-86 323.9 277 63.9
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.1e-86 323.9 277 63.9
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.5e-86 323.6 207 77.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.5e-86 323.6 264 62.5
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.9e-86 323.2 207 77.8
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 3.6e-85 318.9 225 71.1
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.6e-85 318.9 183 83.1
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 6.2e-85 318.2 194 78.9
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 8.1e-85 317.8 199 79.9
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 6.4e-82 308.1 190 80.5
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 2.7e-80 302.8 258 62.4
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.1e-78 297.4 192 75.5
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.3e-78 295.8 182 79.1
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 4.3e-78 295.4 191 78.5
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 5.2e-76 288.5 203 73.4
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 5.2e-76 288.5 203 73.4
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.2e-74 283.1 195 68.7
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 4.9e-74 282.0 167 82.0
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.1e-73 280.8 190 74.2
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.1e-65 254.2 204 60.8
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 4.0e-60 235.7 193 59.6
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 8.1e-53 211.5 140 73.6
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 7.6e-51 204.9 121 83.5
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.3e-50 204.1 223 51.1
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 3.1e-44 183.0 103 83.5
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 8.5e-34 148.3 93 78.5
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 7.4e-30 135.2 81 81.5
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.4e-25 120.9 86 67.4
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 5.5e-25 119.0 157 46.5
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.7e-24 116.7 80 71.2
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.3e-15 87.0 152 32.9
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 5.2e-15 85.9 87 50.6
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 1.6e-08 64.3 163 30.7
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 3.6e-08 63.2 35 91.4
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-07 60.5 31 90.3


User provided reference genes

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