Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.2e-101 373.6 258 100.0
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 7.8e-77 291.2 259 62.2
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 4.9e-63 245.4 311 57.2
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 3.3e-51 206.1 262 55.3
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.9e-47 193.0 174 63.2
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 5.5e-46 188.7 174 63.2
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.2e-45 187.6 176 63.1
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 8.2e-42 174.9 172 55.2
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 9.0e-41 171.4 172 54.1
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.3e-39 167.5 327 40.4
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.1e-17 94.7 135 45.2
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 5.3e-17 92.4 203 40.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 5.3e-17 92.4 203 40.4
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.7e-16 90.1 142 43.7
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 7.7e-16 88.6 166 38.6
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.9e-15 86.7 195 39.0
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 3.8e-15 86.3 178 38.2
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 6.5e-15 85.5 196 35.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.5e-14 83.6 176 38.6
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.1e-13 80.5 175 41.7
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 2.7e-13 80.1 118 42.4
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 3.6e-13 79.7 121 46.3
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 3.6e-13 79.7 104 51.0
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 4.7e-13 79.3 177 37.3
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 4.7e-13 79.3 183 37.2
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 8.0e-13 78.6 106 50.9
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 2.3e-12 77.0 204 34.8
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 2.3e-12 77.0 166 35.5
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 1.5e-11 74.3 108 50.9
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.7e-10 70.9 187 34.2
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.2e-10 70.5 143 42.7
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.8e-10 70.1 190 32.6
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 6.3e-10 68.9 173 34.1
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.1e-09 68.2 106 43.4
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.1e-09 68.2 170 33.5
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 3.1e-09 66.6 150 38.7
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 3.1e-09 66.6 187 36.9
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.1e-09 66.6 187 36.9
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.4e-09 65.9 158 34.8
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 7.0e-09 65.5 104 43.3
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 7.0e-09 65.5 181 54.7
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 9.1e-09 65.1 168 36.9
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 9.1e-09 65.1 95 41.1
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 2.0e-08 63.9 164 34.1
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.0e-08 63.9 172 32.6
COL.COLO4_31421 Corchorus olitorius HOM05D007160 ORTHO05D005331 2.7e-08 63.5 57 63.2
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.5e-08 63.2 105 39.0
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 5.9e-08 62.4 107 43.9
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 7.7e-08 62.0 104 41.3
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.0e-07 61.6 158 36.1
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.7e-07 60.8 105 41.9
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 1.7e-07 60.8 151 36.4
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.7e-07 60.8 174 32.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 2.2e-07 60.5 181 33.1
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 2.2e-07 60.5 162 37.0
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.2e-07 60.5 165 35.2
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 2.2e-07 60.5 108 41.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 3.8e-07 59.7 171 31.6
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.0e-07 59.3 99 42.4
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.0e-07 59.3 99 42.4
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.1e-06 58.2 151 34.4
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-06 58.2 107 41.1
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.5e-06 57.8 132 34.8
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.5e-06 57.8 170 37.6
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 4.2e-06 56.2 107 43.0
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 5.5e-06 55.8 161 32.3
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 5.5e-06 55.8 170 30.6
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 9.4e-06 55.1 96 39.6
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 9.4e-06 55.1 169 31.4
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 9.4e-06 55.1 166 34.9


User provided reference genes

Program Settings