Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.4e-131 473.0 243 100.0
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 5.4e-88 328.2 243 71.6
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.5e-71 272.3 240 59.6
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.3e-70 270.4 240 59.2
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.6e-68 263.5 240 57.9
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.4e-59 233.8 253 55.7
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 4.5e-58 228.8 239 54.0
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.3e-49 200.7 246 52.0
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 7.7e-42 174.9 255 44.3
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.0e-38 164.5 249 40.6
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 8.8e-38 161.4 242 40.9
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.6e-37 159.8 250 40.8
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 9.7e-37 157.9 250 38.8
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 1.3e-36 157.5 253 39.1
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 1.7e-36 157.1 235 43.8
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 3.7e-36 156.0 196 45.9
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 8.3e-36 154.8 241 39.8
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 1.8e-35 153.7 249 38.2
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 3.1e-35 152.9 229 40.6
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 4.1e-35 152.5 226 41.2
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 7.0e-35 151.8 237 41.4
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 2.9e-33 146.4 235 40.4
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 3.8e-33 146.0 250 36.8
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 2.5e-32 143.3 221 39.4
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 4.2e-32 142.5 272 36.4
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.5e-32 142.1 247 39.3
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 9.4e-32 141.4 244 40.2
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 2.7e-31 139.8 208 42.3
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 4.7e-31 139.0 225 40.4
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 4.7e-31 139.0 255 36.9
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.4e-30 137.5 254 37.0
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.8e-30 137.1 247 34.8
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 5.2e-30 135.6 154 47.4
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 6.8e-30 135.2 203 41.9
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 6.8e-30 135.2 256 37.9
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.2e-29 134.4 241 38.6
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 7.5e-29 131.7 196 42.3
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 1.3e-28 131.0 196 42.3
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.3e-28 131.0 242 35.1
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 1.7e-28 130.6 210 40.0
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 2.8e-28 129.8 248 37.5
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 2.4e-27 126.7 255 34.1
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 3.1e-27 126.3 273 34.1
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 4.1e-27 125.9 242 33.9
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 5.4e-27 125.6 212 38.2
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 5.4e-27 125.6 212 38.2
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 5.4e-27 125.6 224 39.3
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 9.1e-27 124.8 199 36.2
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 1.2e-26 124.4 169 45.6
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 1.6e-26 124.0 199 41.7
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 3.5e-26 122.9 200 39.5
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.3e-25 120.9 143 46.9
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 1.7e-25 120.6 144 47.2
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 2.9e-25 119.8 247 32.8
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 8.6e-25 118.2 190 38.4
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.1e-24 117.9 142 47.2
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 1.9e-24 117.1 129 50.4
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 2.5e-24 116.7 235 36.2
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 1.4e-22 110.9 185 39.5
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.4e-22 110.9 121 50.4
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 6.8e-22 108.6 201 36.8
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.2e-21 107.8 139 43.2
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.5e-21 107.5 129 45.0
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 1.5e-21 107.5 198 34.3
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 2.0e-21 107.1 219 36.1
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 4.1e-19 99.4 227 35.2
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.6e-18 97.4 193 36.8
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 4.5e-18 95.9 190 36.3
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.7e-17 94.0 101 50.5
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.9e-16 90.5 179 39.1
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 3.3e-16 89.7 147 42.2
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 8.9e-14 81.6 139 41.0
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 1.5e-13 80.9 337 26.1
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 2.0e-13 80.5 140 39.3
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 7.5e-13 78.6 137 38.7
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.2e-12 77.0 136 33.8
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 8.3e-12 75.1 225 30.7
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 3.2e-11 73.2 146 37.0
QL05p058191 Quercus lobata HOM05D008587 ORTHO05D010485 1.0e-09 68.2 155 31.6
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.3e-09 67.0 118 35.6
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 5.6e-08 62.4 155 28.4
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.1e-07 60.5 128 33.6
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 2.8e-07 60.1 142 30.3
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 2.8e-07 60.1 209 27.8
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.6e-07 59.7 106 33.0
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 4.7e-07 59.3 161 29.2
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 1.1e-06 58.2 140 30.0
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 1.8e-06 57.4 260 27.7
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 3.1e-06 56.6 103 35.0
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 4.0e-06 56.2 162 25.3
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 6.8e-06 55.5 101 33.7
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 8.9e-06 55.1 103 36.9
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 8.9e-06 55.1 87 34.5


User provided reference genes

Program Settings