Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.9e-59 232.3 113 100.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.8e-54 215.7 113 92.9
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.7e-52 209.1 113 88.5
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 6.5e-52 207.2 111 88.3
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-51 206.5 113 89.4
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.9e-51 205.7 111 87.4
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 6.3e-47 190.7 113 81.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 7.7e-45 183.7 111 79.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 7.7e-45 183.7 112 79.5
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 5.0e-44 181.0 122 73.8
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.5e-44 180.6 111 80.2
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.5e-43 178.7 113 74.3
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 7.2e-43 177.2 107 78.5
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 9.4e-43 176.8 113 77.0
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.6e-42 176.0 112 75.0
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.1e-42 175.6 113 74.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.7e-42 175.3 121 72.7
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 3.6e-42 174.9 116 72.4
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.8e-41 172.6 111 77.5
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.8e-41 172.6 113 73.5
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.8e-41 172.6 110 76.4
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.8e-41 172.6 113 76.1
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.0e-41 171.8 111 74.8
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 4.0e-41 171.4 98 82.7
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 5.2e-41 171.0 113 74.3
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 8.8e-41 170.2 112 70.5
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.8e-41 170.2 111 73.9
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 8.8e-41 170.2 112 71.4
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 8.8e-41 170.2 121 70.2
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.2e-40 169.9 112 72.3
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.2e-40 169.9 113 74.3
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.5e-40 169.5 107 73.8
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.5e-40 169.5 107 73.8
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-40 169.1 112 72.3
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.0e-40 169.1 112 72.3
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.0e-40 169.1 112 72.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 2.6e-40 168.7 112 69.6
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.6e-40 168.7 112 71.4
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 2.6e-40 168.7 113 73.5
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 2.6e-40 168.7 113 74.3
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 3.4e-40 168.3 112 71.4
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 3.4e-40 168.3 111 73.9
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 3.4e-40 168.3 99 80.8
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 5.7e-40 167.5 112 69.6
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 7.5e-40 167.2 112 70.5
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 7.5e-40 167.2 112 70.5
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 9.8e-40 166.8 112 71.4
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 9.8e-40 166.8 112 70.5
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 9.8e-40 166.8 113 71.7
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 9.8e-40 166.8 111 71.2
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.3e-39 166.4 112 70.5
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.3e-39 166.4 97 77.3
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.7e-39 166.0 95 81.1
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.7e-39 166.0 112 71.4
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 2.2e-39 165.6 111 72.1
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 2.8e-39 165.2 99 76.8
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 8.3e-39 163.7 111 72.1
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-38 163.3 113 70.8
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.1e-38 163.3 113 70.8
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.4e-38 162.9 112 67.9
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 3.1e-38 161.8 112 69.6
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 4.1e-38 161.4 94 79.8
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 7.0e-38 160.6 112 71.4
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.0e-37 159.1 110 68.2
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 2.0e-37 159.1 110 68.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.7e-37 158.7 99 75.8
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.7e-37 158.7 112 68.8
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 3.5e-37 158.3 100 72.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 4.5e-37 157.9 112 69.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.0e-36 156.8 110 65.5
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.3e-36 156.4 101 70.3
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.3e-36 156.4 113 67.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.3e-36 156.4 110 66.4
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.3e-36 156.4 99 69.7
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 5.0e-36 154.5 99 74.7
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.5e-35 152.9 107 72.0
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.9e-35 152.5 109 66.1
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 3.2e-35 151.8 101 70.3
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.2e-34 149.8 87 77.0
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 1.6e-34 149.4 97 69.1
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.6e-34 149.4 110 64.5
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.8e-34 148.7 76 86.8
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.0e-33 146.7 99 66.7
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.3e-33 145.6 97 69.1
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 5.2e-33 144.4 101 72.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 2.6e-32 142.1 113 65.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 3.4e-32 141.7 96 67.7
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 7.5e-32 140.6 100 62.0
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.3e-31 139.8 76 81.6
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.2e-31 139.0 73 83.6
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.8e-31 138.7 94 66.0
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.1e-30 136.7 76 80.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.8e-30 136.0 84 75.0
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 4.1e-30 134.8 109 58.7
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.2e-29 133.3 104 62.5
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.5e-29 131.3 97 62.9
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 5.9e-29 131.0 86 74.4
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 7.8e-29 130.6 77 77.9
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 8.6e-28 127.1 77 75.3
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 5.7e-24 114.4 97 51.5
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 6.4e-23 110.9 95 56.8
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 5.4e-22 107.8 101 51.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 1.7e-20 102.8 87 54.0
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 3.6e-18 95.1 77 55.8
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.0e-16 89.4 55 72.7
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 7.0e-14 80.9 110 37.3
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 2.1e-10 69.3 89 41.6
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 2.2e-07 59.3 37 78.4
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 9.2e-06 53.9 78 35.9


User provided reference genes

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