Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G143100 Theobroma cacao HOM05D000475 ORTHO05D000343 2.5e-254 881.7 482 100.0
Duzib235G1242 Durio zibethinus HOM05D000475 ORTHO05D000343 6.2e-144 515.0 425 66.8
Duzib160G0326 Durio zibethinus HOM05D000475 ORTHO05D000343 2.4e-119 433.3 592 45.9
COL.COLO4_30994 Corchorus olitorius HOM05D000475 ORTHO05D000343 6.3e-112 408.7 492 50.8
Gorai.011G048800 Gossypium raimondii HOM05D000475 ORTHO05D000343 3.6e-107 392.9 486 49.0
Gohir.A10G044700 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.8e-106 390.6 486 49.0
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 4.9e-24 116.7 370 29.5
Ciclev10014264m.g Citrus clementina HOM05D000475 ORTHO05D000343 4.6e-22 110.2 393 29.3
Potri.015G122300 Populus trichocarpa HOM05D000475 ORTHO05D000343 1.3e-21 108.6 357 28.3
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-20 105.1 344 30.2
Atru.chr10.538 Acer truncatum HOM05D000475 ORTHO05D000343 1.9e-20 104.8 344 30.2
TWI38G1149 Tripterygium wilfordii HOM05D000475 ORTHO05D000343 1.0e-16 92.4 190 35.8
TAR626G0180 Trochodendron aralioides HOM05D000475 ORTHO05D000343 2.2e-16 91.3 327 30.0
RcHm_v2.0_Chr5g0020111 Rosa chinensis HOM05D000475 ORTHO05D000343 7.2e-15 86.3 220 32.7
Prupe.4G112100 Prunus persica HOM05D000475 ORTHO05D000343 9.3e-15 85.9 203 32.5
QL11p016442 Quercus lobata HOM05D000475 ORTHO05D000343 1.3e-13 82.0 485 26.2
MD05G1251600 Malus domestica HOM05D000475 ORTHO05D000343 3.3e-12 77.4 214 31.8
Lj1C1145T6 Lonicera japonica HOM05D000475 ORTHO05D000343 7.4e-12 76.3 423 26.2
Dinv01945 Davidia involucrata HOM05D000475 ORTHO05D000343 1.6e-11 75.1 452 25.2
FvH4_3g12300 Fragaria vesca HOM05D000475 ORTHO05D000343 2.2e-11 74.7 220 30.9
Glyma.20G019900 Glycine max HOM05D000475 ORTHO05D000343 1.8e-10 71.6 174 35.1
MD10G1232100 Malus domestica HOM05D000475 ORTHO05D000343 2.4e-10 71.2 200 31.5
Lalb_Chr05g0219681 Lupinus albus HOM05D000475 ORTHO05D000343 3.1e-10 70.9 197 30.5
Cfa000709 Carpinus fangiana HOM05D000475 ORTHO05D000343 6.9e-10 69.7 348 27.3
THA.LOC104814360 Tarenaya hassleriana HOM05D000475 ORTHO05D000343 3.4e-09 67.4 174 32.8
CiPaw.09G077100 Carya illinoinensis HOM05D000475 ORTHO05D000343 5.9e-09 66.6 218 32.1
CiPaw.10G064600 Carya illinoinensis HOM05D000475 ORTHO05D000343 3.8e-08 63.9 258 31.4
Lj4g0015823 Lotus japonicus HOM05D000475 ORTHO05D000343 3.2e-07 60.8 247 26.3
Sp4g17370 Schrenkiella parvula HOM05D000475 ORTHO05D000343 3.2e-07 60.8 173 32.4
CAN.G149.32 Capsicum annuum HOM05D000475 ORTHO05D000343 2.1e-06 58.2 260 29.2
Sed0010387 Sechium edule HOM05D000475 ORTHO05D025090 3.6e-06 57.4 240 26.2
Thhalv10016310m.g Eutrema salsugineum HOM05D000475 ORTHO05D000343 6.1e-06 56.6 250 25.6
VMungo0251G2827 Vigna mungo HOM05D000475 ORTHO05D000343 7.9e-06 56.2 163 31.3


User provided reference genes

Program Settings