Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 2.6e-46 188.3 92 100.0
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 4.7e-40 167.5 92 89.1
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.7e-31 137.1 92 75.0
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 2.0e-30 135.6 93 68.8
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 3.3e-30 134.8 92 75.0
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 4.4e-30 134.4 92 75.0
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 9.7e-30 133.3 81 77.8
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 2.2e-29 132.1 91 73.6
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 2.8e-29 131.7 79 78.5
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 6.3e-29 130.6 79 78.5
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 1.8e-28 129.0 82 73.2
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 2.4e-28 128.6 81 71.6
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 3.1e-28 128.3 82 73.2
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 4.1e-28 127.9 81 71.6
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 5.3e-28 127.5 91 63.7
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 4.5e-27 124.4 86 67.4
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 5.9e-27 124.0 85 67.1
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 7.7e-27 123.6 82 67.1
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 7.7e-27 123.6 82 67.1
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 7.7e-27 123.6 85 68.2
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.3e-26 122.9 79 72.2
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 2.9e-26 121.7 86 67.4
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 2.9e-26 121.7 81 69.1
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 5.0e-26 120.9 82 65.9
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 8.5e-26 120.2 82 67.1
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 8.5e-26 120.2 81 69.1
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.5e-25 119.4 88 67.0
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 2.5e-25 118.6 81 67.9
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 3.2e-25 118.2 80 66.2
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 3.2e-25 118.2 80 71.2
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 3.2e-25 118.2 80 68.8
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 3.2e-25 118.2 89 64.0
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 5.5e-25 117.5 87 63.2
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 9.4e-25 116.7 74 74.3
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 1.6e-24 115.9 80 67.5
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 2.1e-24 115.5 80 66.2
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 2.7e-24 115.2 81 66.7
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 3.6e-24 114.8 79 65.8
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 3.6e-24 114.8 80 67.5
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 4.7e-24 114.4 79 65.8
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 8.0e-24 113.6 81 61.7
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 8.0e-24 113.6 84 60.7
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 8.0e-24 113.6 84 60.7
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 8.0e-24 113.6 79 63.3
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 1.0e-23 113.2 90 62.2
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 1.8e-23 112.5 83 60.2
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 1.8e-23 112.5 83 60.2
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 1.8e-23 112.5 83 60.2
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 1.8e-23 112.5 82 65.9
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.3e-23 112.1 88 64.8
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 2.3e-23 112.1 80 62.5
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 3.0e-23 111.7 78 65.4
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 4.0e-23 111.3 80 66.2
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 5.2e-23 110.9 81 60.5
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 5.2e-23 110.9 81 60.5
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 5.2e-23 110.9 80 61.2
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 5.2e-23 110.9 80 61.2
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 8.8e-23 110.2 84 60.7
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 1.2e-22 109.8 80 62.5
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 1.2e-22 109.8 78 65.4
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 2.0e-22 109.0 80 60.0
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 2.6e-22 108.6 81 59.3
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 4.4e-22 107.8 88 59.1
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 4.4e-22 107.8 79 58.2
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 4.4e-22 107.8 78 62.8
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 6.3e-21 104.0 80 62.5
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 1.1e-20 103.2 79 63.3
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 1.4e-20 102.8 81 60.5
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 1.1e-17 93.2 81 53.1
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 2.5e-17 92.0 84 54.8
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 2.5e-17 92.0 75 56.0
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 5.4e-12 74.3 60 60.0
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 6.6e-10 67.4 48 62.5
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.9e-09 65.9 81 39.5
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 7.3e-09 63.9 74 41.9
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 1.0e-07 60.1 79 35.4
SEGI_25488 Sequoiadendron giganteum HOM05D007940 ORTHO05D010046 6.8e-07 57.4 68 36.8


User provided reference genes

Program Settings