Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G139900 Theobroma cacao HOM05D000003 ORTHO05D002259 2.8e-67 258.5 128 100.0
Thecc.04G000700 Theobroma cacao HOM05D000003 ORTHO05D002259 5.4e-10 68.2 125 34.4
Thecc.09G263100 Theobroma cacao HOM05D000003 ORTHO05D002259 1.2e-09 67.0 91 39.6
Thecc.05G093100 Theobroma cacao HOM05D000003 ORTHO05D002259 7.7e-09 64.3 91 36.3
Thecc.K0005100 Theobroma cacao HOM05D000003 ORTHO05D002259 1.3e-08 63.5 91 36.3
Thecc.06G083800 Theobroma cacao HOM05D000101 ORTHO05D000089 2.9e-08 62.4 91 33.0
Thecc.06G140500 Theobroma cacao HOM05D000003 ORTHO05D002259 5.0e-08 61.6 34 79.4
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 5.0e-08 61.6 92 32.6
Duzib160G0279 Durio zibethinus HOM05D000065 ORTHO05D001606 1.9e-07 59.7 45 66.7
Hma1.2p1_3154F.1_g333360 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 2.5e-07 59.3 91 37.4
Thecc.05G035100 Theobroma cacao HOM05D000003 ORTHO05D002259 3.2e-07 58.9 92 38.0
Thecc.06G139700 Theobroma cacao HOM05D000065 ORTHO05D001606 3.2e-07 58.9 45 64.4
Thecc.01G176600 Theobroma cacao HOM05D000003 ORTHO05D002259 4.2e-07 58.5 91 35.2
Thecc.04G115600 Theobroma cacao HOM05D000003 ORTHO05D002259 5.5e-07 58.2 91 36.3
Thecc.03G002300 Theobroma cacao HOM05D000003 ORTHO05D002259 7.2e-07 57.8 91 31.9
COL.COLO4_23441 Corchorus olitorius HOM05D000003 ORTHO05D002259 9.4e-07 57.4 93 38.7
COL.COLO4_36005 Corchorus olitorius HOM05D000003 ORTHO05D002259 1.6e-06 56.6 91 30.8
COL.COLO4_30977 Corchorus olitorius HOM05D000065 ORTHO05D001606 2.1e-06 56.2 46 71.7
COL.COLO4_30972 Corchorus olitorius HOM05D000065 ORTHO05D016413 2.7e-06 55.8 45 62.2
Thecc.04G117300 Theobroma cacao HOM05D000003 ORTHO05D002259 2.7e-06 55.8 91 31.9
Thecc.06G139800 Theobroma cacao HOM05D000065 ORTHO05D001606 3.6e-06 55.5 44 70.5
COL.COLO4_30971 Corchorus olitorius HOM05D000065 ORTHO05D016413 6.1e-06 54.7 63 47.6


User provided reference genes

Program Settings