Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G122100 Theobroma cacao HOM05D020587 ORTHO05D025708 3.3e-43 177.9 89 100.0
Thecc.06G121900 Theobroma cacao HOM05D020587 ORTHO05D025708 8.0e-29 130.2 91 74.7
Gorai.013G226900 Gossypium raimondii HOM05D020587 ORTHO05D025708 2.4e-09 65.5 86 41.9
Gohir.A13G192700 Gossypium hirsutum HOM05D020587 ORTHO05D025708 9.2e-09 63.5 80 42.5
Prupe.1G436400 Prunus persica HOM05D000955 ORTHO05D001429 1.6e-08 62.8 65 49.2
Gohir.D13G198100 Gossypium hirsutum HOM05D020587 ORTHO05D025708 2.0e-08 62.4 81 40.7
CiPaw.15G060000 Carya illinoinensis HOM05D000955 ORTHO05D001429 1.1e-06 56.6 73 39.7
Thecc.08G009300 Theobroma cacao HOM05D000955 ORTHO05D001429 3.3e-06 55.1 71 42.3
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 4.3e-06 54.7 73 38.4
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 5.6e-06 54.3 88 38.6
Dinv35967 Davidia involucrata HOM05D000955 ORTHO05D001429 9.5e-06 53.5 78 39.7
Gohir.A08G147600 Gossypium hirsutum HOM05D020587 ORTHO05D025176 9.5e-06 53.5 78 41.0
Gohir.D06G016400 Gossypium hirsutum HOM05D000955 ORTHO05D001429 9.5e-06 53.5 73 42.5


User provided reference genes

Program Settings