Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.9e-53 212.2 106 100.0
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.7e-30 136.0 120 69.2
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 1.9e-24 115.9 99 68.7
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 3.2e-24 115.2 99 68.7
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 9.2e-24 113.6 115 55.7
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.6e-23 112.8 99 67.7
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 2.0e-23 112.5 113 54.0
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 1.7e-22 109.4 118 55.9
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 6.6e-22 107.5 108 56.5
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.9e-21 105.9 109 54.1
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.2e-20 103.2 113 55.8
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 3.1e-19 98.6 115 47.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 8.9e-19 97.1 115 47.0
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 8.9e-19 97.1 115 51.3
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 2.6e-18 95.5 120 45.8
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 4.4e-18 94.7 117 52.1
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 4.4e-18 94.7 117 52.1
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 4.4e-18 94.7 117 52.1
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 5.8e-18 94.4 117 53.8
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 7.5e-18 94.0 118 51.7
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 9.8e-18 93.6 112 49.1
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 9.8e-18 93.6 116 49.1
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 2.2e-17 92.4 113 49.6
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 2.2e-17 92.4 116 49.1
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 3.7e-17 91.7 113 50.4
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 3.7e-17 91.7 107 50.5
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 4.9e-17 91.3 125 47.2
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 8.3e-17 90.5 116 47.4
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 1.4e-16 89.7 108 50.0
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 1.9e-16 89.4 118 48.3
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 1.2e-15 86.7 110 47.3
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 2.1e-15 85.9 116 48.3
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 2.3e-14 82.4 114 48.2
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 5.1e-14 81.3 108 45.4
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 6.6e-14 80.9 115 47.0
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.1e-13 80.1 113 47.8
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.1e-13 80.1 113 42.5
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 1.5e-13 79.7 115 42.6
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.5e-13 79.7 114 45.6
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.5e-13 79.7 113 43.4
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.5e-13 79.7 106 47.2
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 1.6e-12 76.3 111 39.6
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 1.6e-12 76.3 114 42.1
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 2.1e-12 75.9 115 46.1
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.1e-12 75.9 112 42.0
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 6.2e-12 74.3 108 46.3
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 1.1e-11 73.6 111 40.5
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.4e-11 73.2 44 77.3
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 1.4e-11 73.2 109 43.1
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 1.4e-11 73.2 116 45.7
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 2.3e-11 72.4 115 42.6
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 3.1e-11 72.0 121 41.3
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 6.8e-11 70.9 109 42.2
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 1.2e-10 70.1 110 37.3
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 2.0e-10 69.3 101 44.6
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 2.0e-10 69.3 113 43.4
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 3.4e-10 68.6 74 52.7
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 3.4e-10 68.6 119 41.2
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 3.4e-10 68.6 107 39.3
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 4.4e-10 68.2 101 42.6
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 5.8e-10 67.8 113 39.8
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 9.9e-10 67.0 112 39.3
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 1.7e-09 66.2 119 37.8
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.7e-09 66.2 100 45.0
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 3.8e-09 65.1 109 39.4
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 3.8e-09 65.1 91 42.9
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 3.8e-09 65.1 106 36.8
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 8.4e-09 63.9 106 36.8
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 4.6e-07 58.2 96 46.9
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 7.8e-07 57.4 119 36.1
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 3.0e-06 55.5 63 49.2
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 5.1e-06 54.7 57 50.9


User provided reference genes

Program Settings