Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G093400 Theobroma cacao HOM05D001332 ORTHO05D007191 2.7e-29 131.3 67 100.0
Thecc.06G093300 Theobroma cacao HOM05D001332 ORTHO05D007191 1.9e-11 72.0 41 80.5
COL.COLO4_30444 Corchorus olitorius HOM05D001332 ORTHO05D007191 1.3e-10 69.3 43 74.4
Duzib235G0321 Durio zibethinus HOM05D001332 ORTHO05D007191 2.8e-10 68.2 43 74.4
Gorai.011G073600 Gossypium raimondii HOM05D001332 ORTHO05D007191 8.2e-10 66.6 43 72.1
Gohir.A10G082000 Gossypium hirsutum HOM05D001332 ORTHO05D007191 1.4e-09 65.9 43 72.1
Gohir.A06G080866 Gossypium hirsutum HOM05D001332 ORTHO05D007191 7.6e-08 60.1 51 54.9
GSVIVG01017055001 Vitis vinifera HOM05D001332 ORTHO05D007191 1.0e-07 59.7 43 62.8
COL.COLO4_30449 Corchorus olitorius HOM05D001332 ORTHO05D007191 2.2e-07 58.5 42 59.5
Duzib235G1116 Durio zibethinus HOM05D001332 ORTHO05D007191 3.8e-07 57.8 43 58.1
Gohir.A10G082200 Gossypium hirsutum HOM05D001332 ORTHO05D007191 3.8e-07 57.8 43 55.8
Gohir.D10G069533 Gossypium hirsutum HOM05D001332 ORTHO05D007191 3.8e-07 57.8 43 55.8
Gorai.011G073500 Gossypium raimondii HOM05D001332 ORTHO05D007191 3.8e-07 57.8 43 55.8
Atru.chr5.1338 Acer truncatum HOM05D001332 ORTHO05D007191 4.9e-07 57.4 43 58.1
Atru.chr5.1337 Acer truncatum HOM05D001332 ORTHO05D007191 6.5e-07 57.0 43 60.5
Atru.chr5.1339 Acer truncatum HOM05D001332 ORTHO05D007191 8.4e-07 56.6 43 60.5
Hma1.2p1_1195F.1_g265920 Hydrangea macrophylla HOM05D001332 ORTHO05D007191 8.4e-07 56.6 42 59.5
QL05p021486 Quercus lobata HOM05D001332 ORTHO05D007191 8.4e-07 56.6 43 58.1
CiPaw.01G235000 Carya illinoinensis HOM05D001332 ORTHO05D007191 1.4e-06 55.8 43 53.5
Sabra03G0027100 Salix brachista HOM05D001332 ORTHO05D007191 1.4e-06 55.8 43 58.1
COL.COLO4_30445 Corchorus olitorius HOM05D001332 ORTHO05D007191 1.9e-06 55.5 35 71.4
Gorai.010G093600 Gossypium raimondii HOM05D001332 ORTHO05D007191 2.5e-06 55.1 50 52.0
Manes.04G130600 Manihot esculenta HOM05D001332 ORTHO05D007191 2.5e-06 55.1 42 57.1
Eucgr.F03046 Eucalyptus grandis HOM05D001332 ORTHO05D007191 4.2e-06 54.3 43 58.1
COL.COLO4_30446 Corchorus olitorius HOM05D001332 ORTHO05D007191 5.5e-06 53.9 42 57.1
COL.COLO4_30447 Corchorus olitorius HOM05D001332 ORTHO05D007191 5.5e-06 53.9 43 55.8
Actinidia32721 Actinidia chinensis HOM05D001332 ORTHO05D007191 7.1e-06 53.5 43 55.8
Thecc.06G093500 Theobroma cacao HOM05D001332 ORTHO05D007191 7.1e-06 53.5 42 59.5
Hma1.2p1_1195F.1_g265910 Hydrangea macrophylla HOM05D001332 ORTHO05D007191 9.3e-06 53.1 42 52.4


User provided reference genes

Program Settings