Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.4e-78 295.4 151 100.0
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 9.2e-78 293.5 149 100.0
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 4.7e-74 281.2 149 93.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.1e-73 278.5 149 92.6
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.2e-72 276.6 149 92.6
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 1.2e-72 276.6 149 92.6
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 3.8e-71 271.6 149 89.9
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 9.9e-64 246.9 139 84.9
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 4.9e-63 244.6 143 83.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 8.4e-63 243.8 143 82.5
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 1.1e-62 243.4 143 83.9
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 1.9e-62 242.7 145 82.1
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 5.4e-62 241.1 143 80.4
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 9.3e-62 240.4 149 80.5
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.2e-61 240.0 143 79.7
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.2e-61 240.0 143 83.2
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 2.1e-61 239.2 144 81.9
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 2.7e-61 238.8 142 78.9
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 2.7e-61 238.8 142 78.9
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.7e-61 238.8 142 78.9
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.7e-61 238.8 142 78.9
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 7.9e-61 237.3 143 77.6
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 7.9e-61 237.3 149 77.9
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 7.9e-61 237.3 143 79.0
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.8e-60 236.1 149 77.9
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.8e-60 236.1 142 80.3
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 2.3e-60 235.7 143 76.9
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 3.9e-60 235.0 140 80.0
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 6.7e-60 234.2 143 76.9
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.1e-59 233.4 143 79.0
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 2.5e-59 232.3 142 78.2
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 3.3e-59 231.9 143 77.6
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 3.3e-59 231.9 144 76.4
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 4.3e-59 231.5 143 78.3
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 4.3e-59 231.5 138 79.7
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.3e-59 231.5 143 75.5
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.3e-59 231.5 143 75.5
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 5.6e-59 231.1 148 76.4
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 5.6e-59 231.1 142 76.1
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 5.6e-59 231.1 142 76.1
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 5.6e-59 231.1 142 77.5
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 5.6e-59 231.1 142 77.5
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 9.6e-59 230.3 148 75.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 9.6e-59 230.3 144 76.4
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.3e-58 229.9 143 77.6
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.1e-58 229.2 142 76.8
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 2.1e-58 229.2 142 74.6
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 2.1e-58 229.2 144 77.1
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 2.8e-58 228.8 139 79.1
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.6e-58 228.4 143 75.5
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.6e-58 228.4 149 77.2
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.6e-58 228.4 157 73.9
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.8e-58 228.0 160 70.6
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 4.8e-58 228.0 142 76.1
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 8.1e-58 227.3 143 75.5
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 8.1e-58 227.3 143 77.6
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.1e-57 226.9 143 74.1
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.8e-57 226.1 152 72.4
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.1e-57 225.3 160 70.0
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.1e-57 225.3 143 75.5
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 5.3e-57 224.6 143 76.9
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 6.9e-57 224.2 146 76.7
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.2e-56 223.4 146 76.0
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.2e-56 223.4 142 73.2
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.0e-56 222.6 142 74.6
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.4e-56 221.9 144 75.0
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 3.4e-56 221.9 138 76.8
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 4.5e-56 221.5 144 75.7
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 5.8e-56 221.1 143 74.8
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 7.6e-56 220.7 139 79.1
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 4.9e-55 218.0 139 78.4
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 4.9e-55 218.0 144 75.0
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.4e-55 217.6 149 73.2
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 6.4e-55 217.6 149 73.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 1.4e-54 216.5 144 76.4
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 2.4e-54 215.7 143 72.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 3.2e-54 215.3 141 74.5
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.2e-53 213.4 143 71.3
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.2e-53 213.4 144 73.6
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.2e-53 213.4 144 70.1
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 3.5e-53 211.8 142 69.7
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 7.9e-53 210.7 144 69.4
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.8e-52 209.5 138 74.6
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 1.8e-52 209.5 145 73.1
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 3.9e-52 208.4 144 68.8
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.5e-51 205.7 147 70.1
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 4.8e-50 201.4 164 62.8
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.4e-49 199.9 138 73.2
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 2.2e-47 192.6 139 66.9
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 3.8e-47 191.8 137 66.4
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 6.5e-47 191.0 133 70.7
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 4.1e-41 171.8 184 50.0
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 4.5e-40 168.3 218 45.0
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 5.9e-40 167.9 190 51.1
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.9e-39 165.6 183 50.8
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 6.5e-39 164.5 138 57.2
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 2.1e-37 159.5 140 58.6
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 2.3e-36 156.0 109 72.5
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.4e-33 146.7 155 53.5
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 1.5e-32 143.3 141 55.3
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 5.9e-32 141.4 85 80.0
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.1e-30 137.1 81 79.0
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.2e-30 135.6 106 65.1
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 3.2e-30 135.6 119 53.8
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 4.2e-30 135.2 142 48.6
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 7.2e-30 134.4 118 53.4
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.8e-28 129.8 104 67.3
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 6.7e-28 127.9 97 67.0
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.1e-25 120.6 114 56.1
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.2e-24 117.1 63 85.7
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 1.7e-23 113.2 194 39.7
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 3.9e-20 102.1 124 46.8
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 5.2e-20 101.7 112 43.8
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.0e-19 99.8 134 42.5
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.4e-19 98.6 65 67.7
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 1.3e-18 97.1 51 86.3
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.8e-18 95.9 95 49.5
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 8.2e-18 94.4 73 63.0
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.5e-16 88.6 79 54.4
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 1.5e-14 83.6 107 39.3
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.2e-08 63.9 79 38.0
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 1.3e-07 60.5 150 28.0


User provided reference genes

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