Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.6e-129 464.9 235 100.0
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.7e-115 419.5 233 91.8
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 7.3e-114 414.1 229 90.0
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 8.1e-113 410.6 221 92.8
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 4.0e-112 408.3 232 87.5
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 4.0e-112 408.3 232 89.7
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 6.8e-112 407.5 232 87.1
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 6.8e-112 407.5 232 88.4
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.2e-111 406.8 232 87.5
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.6e-111 405.6 232 86.2
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 2.6e-111 405.6 232 87.1
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 3.4e-111 405.2 230 87.8
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 3.4e-111 405.2 230 87.4
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 4.4e-111 404.8 233 86.7
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 5.8e-111 404.4 232 87.1
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 1.7e-110 402.9 232 87.5
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 2.2e-110 402.5 230 86.5
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.7e-110 401.7 234 88.9
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 8.4e-110 400.6 220 91.4
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.9e-109 399.4 230 85.7
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 5.4e-109 397.9 225 88.0
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 9.2e-109 397.1 242 83.9
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 9.2e-109 397.1 242 83.9
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 1.2e-108 396.7 232 85.3
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.1e-108 396.0 230 85.7
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 2.7e-108 395.6 231 85.3
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 3.5e-108 395.2 232 85.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 6.0e-108 394.4 235 85.5
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.3e-107 393.3 233 85.4
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.0e-107 392.1 231 85.3
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 5.1e-107 391.3 233 85.4
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 8.6e-107 390.6 233 86.3
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.1e-106 390.2 239 83.3
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.1e-106 390.2 234 85.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.9e-106 389.4 232 83.2
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.9e-106 389.4 232 86.2
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.9e-106 389.4 233 83.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.3e-106 388.3 233 85.8
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 7.3e-106 387.5 233 84.5
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 9.6e-106 387.1 233 84.5
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.6e-105 386.3 230 83.0
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 2.1e-105 386.0 237 81.4
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.1e-105 386.0 234 85.0
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 2.1e-105 386.0 232 85.3
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.1e-105 386.0 233 84.1
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.1e-104 383.6 234 83.8
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-104 383.6 234 84.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.4e-104 383.3 243 80.2
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.4e-104 383.3 243 80.2
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 231 82.7
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 231 82.7
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.1e-104 382.1 234 83.3
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.0e-103 379.4 231 83.1
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.3e-102 376.7 241 81.3
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.8e-102 375.2 241 80.9
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 4.9e-102 374.8 216 85.6
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.1e-101 373.6 229 82.1
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.1e-101 373.6 241 79.3
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 7.1e-101 370.9 229 82.1
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.5e-100 368.6 240 79.2
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.3e-99 365.9 237 77.6
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 5.1e-99 364.8 235 77.9
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.5e-98 363.2 240 79.2
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.9e-98 362.8 242 78.9
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.1e-96 357.1 239 77.0
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 9.0e-96 354.0 204 88.2
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.8e-94 348.6 234 79.1
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.3e-91 340.1 234 72.2
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.0e-91 339.0 248 71.8
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.9e-90 336.3 230 73.0
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.5e-90 335.9 235 71.1
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 3.3e-90 335.5 232 74.6
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 5.6e-90 334.7 232 71.6
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 5.6e-90 334.7 199 84.9
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.1e-89 332.8 230 70.0
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.4e-88 329.3 236 69.9
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 9.0e-88 327.4 235 71.5
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 9.0e-88 327.4 199 82.9
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.5e-87 326.6 233 72.1
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 9.3e-85 317.4 252 69.4
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.6e-84 316.6 252 69.8
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 4.3e-82 308.5 200 78.5
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 8.1e-81 304.3 172 87.8
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.2e-78 296.2 232 67.2
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.3e-74 282.3 243 61.7
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 2.1e-73 279.6 220 69.5
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.1e-73 279.6 234 61.1
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.2e-65 253.1 165 78.8
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 5.9e-63 245.0 219 53.4
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.0e-62 244.2 139 88.5
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 2.1e-60 236.5 135 85.2
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.5e-58 230.3 150 76.0
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.5e-58 229.6 242 51.7
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 1.8e-56 223.4 218 51.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.7e-28 129.8 83 77.1
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.7e-26 122.1 221 34.4
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 4.4e-18 95.9 126 50.8
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.3e-09 67.8 57 61.4
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.7e-06 57.4 45 64.4


User provided reference genes

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