Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 1.1e-138 496.5 237 100.0
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 3.0e-123 445.3 233 88.4
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 3.3e-122 441.8 233 88.0
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.3e-121 439.9 238 87.8
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 1.4e-117 426.4 237 84.0
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 9.3e-117 423.7 234 82.5
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 3.5e-116 421.8 237 82.7
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 4.6e-116 421.4 239 83.3
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 7.9e-116 420.6 237 83.1
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.3e-115 419.9 237 82.3
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 1.8e-115 419.5 237 83.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-115 419.1 237 82.7
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 8.7e-115 417.2 239 82.4
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-113 412.9 237 81.4
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.4e-112 409.8 237 79.7
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.8e-112 409.5 235 81.3
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 2.4e-112 409.1 232 81.0
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 4.5e-111 404.8 235 79.1
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 4.9e-110 401.4 237 76.8
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.9e-109 399.4 235 79.6
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 3.2e-109 398.7 229 78.6
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 7.1e-109 397.5 232 78.4
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.7e-108 395.6 235 77.0
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 4.6e-108 394.8 237 77.2
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 6.0e-108 394.4 226 81.0
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 6.0e-108 394.4 229 77.7
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 2.3e-107 392.5 237 78.1
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.1e-106 390.2 239 76.2
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 1.5e-106 389.8 233 76.0
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 9.6e-106 387.1 211 84.4
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 2.1e-105 386.0 237 74.7
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 2.1e-105 386.0 237 74.7
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 4.8e-105 384.8 256 70.3
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 4.8e-105 384.8 240 74.6
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 6.2e-105 384.4 229 78.2
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.0e-104 381.7 232 74.6
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 3.4e-103 378.6 230 73.0
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 4.5e-103 378.3 292 63.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.0e-102 377.1 223 76.7
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 5.5e-101 371.3 238 72.7
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 9.3e-101 370.5 223 74.4
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 2.7e-100 369.0 237 70.5
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 6.0e-100 367.9 230 72.6
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 7.9e-100 367.5 230 72.6
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 8.7e-99 364.0 236 71.2
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 4.8e-97 358.2 255 66.7
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 2.4e-96 355.9 221 72.9
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 5.3e-96 354.8 221 71.9
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.5e-95 353.2 224 71.9
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 2.2e-94 349.4 230 72.6
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 3.8e-94 348.6 235 71.1
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.8e-91 339.7 176 90.3
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.1e-90 337.0 222 69.8
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 1.5e-90 336.7 240 66.7
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 3.3e-90 335.5 222 67.6
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 2.2e-89 332.8 237 67.9
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.1e-88 330.5 228 67.1
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 4.5e-87 325.1 205 68.8
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.7e-86 323.2 220 64.5
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 8.5e-86 320.9 226 66.8
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.1e-85 320.5 238 63.4
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 5.1e-83 311.6 225 65.3
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 7.0e-80 301.2 239 60.7
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 1.2e-79 300.4 234 61.5
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 1.5e-79 300.1 227 59.9
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.0e-78 297.4 233 61.8
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 3.8e-78 295.4 239 59.8
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.9e-77 293.1 239 59.4
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 1.9e-77 293.1 221 59.7
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 3.2e-77 292.4 180 78.3
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 1.4e-75 287.0 232 59.9
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 1.8e-75 286.6 221 59.7
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.8e-73 278.5 156 85.9
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 1.6e-71 273.5 182 69.2
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 2.9e-70 269.2 233 56.7
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 8.8e-67 257.7 237 55.3
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.8e-64 250.0 136 85.3
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 2.3e-59 233.0 135 78.5
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.5e-58 230.3 124 85.5
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 1.6e-55 220.3 111 91.0
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 7.7e-55 218.0 134 71.6
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 2.1e-52 209.9 203 54.2
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 1.0e-43 181.0 132 61.4
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 3.4e-42 176.0 102 80.4
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 4.4e-42 175.6 194 46.4
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 6.0e-39 165.2 135 58.5
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 9.9e-26 121.3 194 41.8
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 7.1e-24 115.2 85 57.6
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 1.3e-22 110.9 75 57.3
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 2.3e-22 110.2 86 60.5
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 3.3e-21 106.3 79 53.2
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.5e-18 97.4 87 58.6
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 6.4e-17 92.0 58 70.7
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 1.7e-09 67.4 51 72.5
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 7.1e-08 62.0 49 59.2


User provided reference genes

Program Settings