Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G044400 Theobroma cacao HOM05D000002 ORTHO05D000001 5.9e-48 193.7 89 100.0
Thecc.04G046300 Theobroma cacao HOM05D000002 ORTHO05D000001 6.8e-20 100.5 84 56.0
CSS0008639 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-13 79.7 87 42.5
GSVIVG01037631001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.4e-12 76.3 83 43.4
GSVIVG01038695001 Vitis vinifera HOM05D000906 ORTHO05D000713 2.6e-11 72.0 83 38.6
Duzib133G0084 Durio zibethinus HOM05D000002 ORTHO05D000001 1.8e-09 65.9 87 36.8
Lj3g0008931 Lotus japonicus HOM05D000002 ORTHO05D000001 1.2e-08 63.2 65 47.7
TWI81G0517 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 2.7e-08 62.0 91 35.2
Duzib084G1319 Durio zibethinus HOM05D000002 ORTHO05D000001 5.9e-08 60.8 42 59.5
THA.LOC104804916 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.9e-08 60.8 84 40.5
THA.LOC104808467 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.8e-08 60.5 85 42.4
Ciclev10027035m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.3e-07 59.7 73 39.7
Thecc.05G098200 Theobroma cacao HOM05D000002 ORTHO05D000001 3.9e-07 58.2 76 35.5
Psat5g170560 Pisum sativum HOM05D000002 ORTHO05D000047 1.1e-06 56.6 42 59.5
Atru.chr10.209 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 56.2 92 34.8
Psat1g060800 Pisum sativum HOM05D000002 ORTHO05D000001 1.5e-06 56.2 69 42.0
PGR142G1174 Punica granatum HOM05D000002 ORTHO05D000001 1.9e-06 55.8 88 33.0
Ciclev10003832m.g Citrus clementina HOM05D000002 ORTHO05D000001 9.5e-06 53.5 40 47.5


User provided reference genes

Program Settings