Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 3.4e-73 278.5 169 100.0
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 4.0e-53 211.8 121 86.8
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.5e-49 198.7 120 85.0
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 3.5e-49 198.7 120 85.0
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.8e-48 195.3 120 83.3
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 6.1e-46 188.0 169 74.0
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 3.4e-36 155.6 177 53.7
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 1.7e-35 153.3 155 56.8
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.1e-34 150.6 121 65.3
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.8e-34 149.8 105 73.3
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 4.1e-34 148.7 122 64.8
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 4.1e-34 148.7 184 58.7
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 5.4e-34 148.3 175 58.3
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 7.0e-34 147.9 125 64.8
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.0e-32 144.1 123 65.0
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 1.7e-32 143.3 122 63.9
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 2.3e-32 142.9 122 66.4
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.3e-32 142.9 168 54.2
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 3.9e-32 142.1 173 54.3
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 6.6e-32 141.4 168 56.5
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.3e-31 137.9 171 50.3
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 9.5e-31 137.5 169 48.5
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.6e-30 136.7 169 48.5
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 4.7e-30 135.2 121 62.0
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 6.1e-30 134.8 120 63.3
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 8.0e-30 134.4 103 71.8
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 8.0e-30 134.4 127 57.5
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.4e-29 133.7 127 57.5
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.4e-29 133.7 118 61.0
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 5.2e-29 131.7 123 59.3
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 1.2e-28 130.6 158 50.0
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 1.5e-28 130.2 113 65.5
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 3.4e-28 129.0 187 46.5
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 5.8e-28 128.3 168 47.0
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 7.5e-28 127.9 134 56.0
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 9.8e-28 127.5 104 69.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.3e-27 127.1 75 80.0
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 2.9e-27 125.9 117 61.5
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 3.7e-27 125.6 110 61.8
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.7e-27 125.6 123 57.7
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 4.9e-27 125.2 105 61.9
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 6.4e-27 124.8 114 61.4
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 8.3e-27 124.4 112 60.7
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.1e-26 124.0 126 57.1
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.1e-26 124.0 123 56.1
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.4e-26 123.6 119 56.3
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.9e-26 123.2 99 64.6
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 2.4e-26 122.9 125 57.6
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 5.4e-26 121.7 98 64.3
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 7.0e-26 121.3 93 64.5
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 7.0e-26 121.3 128 54.7
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 1.2e-25 120.6 112 58.9
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.6e-25 120.2 112 58.9
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.0e-25 119.8 128 49.2
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 2.7e-25 119.4 107 59.8
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 4.6e-25 118.6 128 55.5
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 4.6e-25 118.6 128 55.5
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.6e-25 118.6 123 56.1
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.0e-24 117.5 107 59.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 2.3e-24 116.3 123 49.6
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 5.0e-24 115.2 123 51.2
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 5.0e-24 115.2 123 51.2
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 5.0e-24 115.2 123 51.2
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 5.0e-24 115.2 121 57.9
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 5.0e-24 115.2 109 57.8
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 6.6e-24 114.8 102 59.8
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 6.6e-24 114.8 126 54.0
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.6e-24 114.4 124 53.2
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 8.6e-24 114.4 126 54.0
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 8.6e-24 114.4 126 49.2
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 8.6e-24 114.4 113 58.4
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.1e-23 114.0 123 49.6
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 1.1e-23 114.0 127 53.5
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.5e-23 113.6 99 66.7
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.9e-23 113.2 93 63.4
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 4.3e-23 112.1 123 49.6
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 4.3e-23 112.1 107 57.9
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 4.3e-23 112.1 117 53.0
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 4.3e-23 112.1 122 52.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 7.3e-23 111.3 96 62.5
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.2e-22 110.5 126 53.2
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.6e-22 110.2 80 68.8
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.8e-22 109.4 123 48.8
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 4.7e-22 108.6 133 49.6
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 4.7e-22 108.6 113 54.9
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 2.3e-21 106.3 110 55.5
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 2.3e-21 106.3 133 48.1
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 3.1e-21 105.9 59 88.1
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 3.1e-21 105.9 104 55.8
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 6.8e-21 104.8 133 48.9
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 2.0e-20 103.2 104 53.8
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 7.5e-20 101.3 74 66.2
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 7.5e-20 101.3 76 65.8
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 2.2e-19 99.8 59 83.1
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 2.2e-19 99.8 52 90.4
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.9e-19 99.4 58 79.3
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 1.6e-17 93.6 153 43.1
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 2.7e-17 92.8 54 75.9
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.3e-16 89.7 53 77.4
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 3.0e-16 89.4 70 61.4
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 5.1e-16 88.6 70 62.9
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 2.5e-15 86.3 46 87.0
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.4e-13 80.5 78 55.1
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 5.2e-13 78.6 81 51.9
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 5.2e-13 78.6 68 54.4
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 5.8e-12 75.1 110 45.5
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.2e-11 73.2 81 50.6
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.9e-11 72.8 103 39.8
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 6.4e-11 71.6 76 48.7
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.4e-10 70.5 41 82.9
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.4e-10 70.5 38 89.5
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 4.1e-10 68.9 39 82.1
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 4.1e-10 68.9 34 97.1
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 7.1e-10 68.2 91 46.2
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 1.6e-09 67.0 51 60.8
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 2.1e-09 66.6 34 91.2
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 2.1e-09 66.6 95 47.4
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.0e-09 65.1 144 36.1
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 1.1e-07 60.8 96 35.4
Lsat_1_v5_gn_9_86741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.6e-06 57.0 51 56.9


User provided reference genes

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