Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.5e-178 629.4 318 100.0
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.0e-174 616.7 317 97.8
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-174 616.3 317 96.5
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.9e-173 612.5 317 95.9
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 7.4e-170 600.5 317 95.0
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 2.8e-169 598.6 317 94.6
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.7e-169 598.2 317 94.3
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 5.5e-165 584.3 319 92.5
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 2.0e-162 575.9 317 89.6
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.4e-162 574.7 317 89.0
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 5.7e-162 574.3 317 89.3
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 9.7e-162 573.5 317 89.0
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.2e-161 572.4 317 89.0
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.4e-160 569.7 317 89.0
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.4e-160 568.9 317 88.6
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 9.1e-160 567.0 317 89.0
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.7e-159 565.5 317 88.0
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 5.9e-159 564.3 317 87.4
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.0e-158 563.5 318 88.7
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 6.5e-158 560.8 317 88.0
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 6.3e-153 544.3 317 85.2
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 8.3e-153 543.9 318 86.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.4e-152 543.1 325 83.4
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 2.4e-152 542.3 317 84.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 3.1e-152 542.0 317 83.9
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 4.1e-152 541.6 317 84.5
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 4.1e-152 541.6 321 83.2
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.2e-151 540.0 317 84.5
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.2e-151 540.0 317 84.5
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 1.6e-151 539.7 317 84.2
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 2.0e-151 539.3 324 82.1
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.0e-151 539.3 317 83.6
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 2.0e-151 539.3 317 83.6
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.7e-151 538.9 317 83.6
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 4.5e-151 538.1 317 83.0
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 4.5e-151 538.1 323 83.9
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.5e-151 538.1 317 83.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 4.5e-151 538.1 319 85.9
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 7.7e-151 537.3 317 83.3
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 7.7e-151 537.3 317 83.0
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 5.0e-150 534.6 320 82.2
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 5.0e-150 534.6 321 82.9
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.1e-149 533.5 317 83.0
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-149 533.5 324 81.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.5e-149 533.1 317 83.0
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.9e-149 532.7 324 81.8
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 9.5e-149 530.4 319 81.2
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.2e-148 530.0 324 81.5
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 2.8e-148 528.9 317 82.6
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 3.6e-148 528.5 321 81.9
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 8.0e-148 527.3 317 82.3
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 8.0e-148 527.3 317 82.3
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 3.0e-147 525.4 317 81.1
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 3.0e-147 525.4 317 80.8
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 3.4e-146 521.9 320 81.6
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.4e-146 521.5 317 83.6
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 5.7e-146 521.2 318 80.8
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 9.8e-146 520.4 325 78.5
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 2.2e-145 519.2 318 80.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 4.9e-145 518.1 323 80.2
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.4e-144 516.5 325 79.7
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 4.1e-144 515.0 325 77.5
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 7.0e-144 514.2 317 78.2
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 2.0e-143 512.7 320 80.3
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 4.5e-143 511.5 325 77.8
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 5.0e-142 508.1 325 78.2
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.1e-141 506.9 317 78.2
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-141 506.1 317 82.0
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.9e-141 506.1 325 77.8
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 2.5e-141 505.8 321 77.9
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.3e-141 505.4 317 77.3
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 5.6e-141 504.6 317 77.6
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 5.6e-141 504.6 317 77.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 9.5e-141 503.8 317 77.3
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.1e-140 502.7 318 77.7
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-140 502.3 300 85.3
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 3.6e-140 501.9 317 77.3
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-138 496.5 300 83.7
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 3.4e-138 495.4 318 77.0
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 1.1e-136 490.3 322 76.7
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.6e-134 481.1 305 82.0
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.1e-131 473.8 300 77.3
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 4.9e-129 464.9 318 73.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 4.6e-127 458.4 317 71.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 5.0e-126 454.9 317 70.3
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.2e-124 450.3 258 88.8
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.1e-123 447.2 317 69.7
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 5.2e-123 444.9 292 74.0
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 1.2e-122 443.7 317 68.5
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 7.5e-122 441.0 317 67.8
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.1e-120 437.2 268 83.2
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.1e-117 427.2 318 64.5
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 5.6e-117 424.9 317 66.6
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.9e-113 412.5 317 64.4
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-113 412.5 257 84.0
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 3.2e-112 409.1 325 60.6
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.0e-110 404.1 317 63.4
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 6.6e-110 401.4 315 62.5
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 4.3e-109 398.7 310 64.2
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 5.6e-109 398.3 231 88.3
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.6e-108 396.7 317 64.7
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 2.4e-104 382.9 317 58.4
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 3.6e-100 369.0 292 63.0
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 9.0e-99 364.4 317 57.4
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.5e-98 363.6 306 66.0
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 8.4e-97 357.8 327 54.4
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 9.3e-96 354.4 316 54.1
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.3e-94 350.5 214 81.8
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.1e-87 326.6 284 60.9
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 6.0e-87 325.1 322 50.3
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.3e-84 317.4 285 56.8
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 7.9e-79 298.1 214 68.7
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 1.4e-67 260.8 294 52.4
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.4e-46 191.0 158 64.6
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.5e-40 169.1 118 68.6
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.4e-37 159.5 108 72.2
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 7.5e-37 158.7 272 37.1
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.8e-30 137.5 112 58.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.3e-30 137.1 111 61.3
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.8e-30 135.6 108 65.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.7e-29 132.5 115 59.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 7.8e-26 122.1 355 29.6
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 7.3e-24 115.5 59 86.4
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 6.1e-23 112.5 72 77.8
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 4.4e-21 106.3 332 27.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 6.2e-15 85.9 59 66.1


User provided reference genes

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