Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G026400 Theobroma cacao HOM05D000003 ORTHO05D002259 9.3e-80 300.1 142 100.0
Thecc.06G027200 Theobroma cacao HOM05D000003 ORTHO05D002259 3.2e-24 115.5 59 93.2
COL.COLO4_27741 Corchorus olitorius HOM05D000003 ORTHO05D002259 7.5e-13 77.8 130 36.2
Thecc.06G027000 Theobroma cacao HOM05D000003 ORTHO05D002259 6.3e-12 74.7 101 40.6
Thecc.05G198700 Theobroma cacao HOM05D000003 ORTHO05D002259 1.2e-10 70.5 114 33.3
COL.COLO4_22651 Corchorus olitorius HOM05D000003 ORTHO05D002259 1.6e-10 70.1 184 28.3
Thecc.07G137100 Theobroma cacao HOM05D000003 ORTHO05D002259 2.0e-10 69.7 130 33.8
Thecc.01G176600 Theobroma cacao HOM05D000003 ORTHO05D002259 3.8e-09 65.5 155 29.0
Atru.chr4.2618 Acer truncatum HOM05D000003 ORTHO05D002259 4.3e-08 62.0 87 36.8
Thecc.06G083800 Theobroma cacao HOM05D000101 ORTHO05D000089 5.6e-08 61.6 134 29.1
COL.COLO4_20696 Corchorus olitorius HOM05D000003 ORTHO05D002259 7.3e-08 61.2 128 32.0
Atru.chr3.2341 Acer truncatum HOM05D000003 ORTHO05D002259 2.8e-07 59.3 98 33.7
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 4.7e-07 58.5 46 58.7
Thecc.K0005100 Theobroma cacao HOM05D000003 ORTHO05D002259 8.0e-07 57.8 47 53.2
Atru.chr2.1988 Acer truncatum HOM05D000003 ORTHO05D002259 1.4e-06 57.0 46 58.7
Thecc.04G251800 Theobroma cacao HOM05D000003 ORTHO05D002259 2.3e-06 56.2 73 43.8
Atru.chr6.158 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-06 55.8 75 41.3
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 3.0e-06 55.8 35 65.7
Atru.chr10.950 Acer truncatum HOM05D000003 ORTHO05D002259 4.0e-06 55.5 44 52.3
COL.COLO4_32459 Corchorus olitorius HOM05D000003 ORTHO05D002259 4.0e-06 55.5 85 35.3
Atru.chr3.2735 Acer truncatum HOM05D000003 ORTHO05D002259 5.2e-06 55.1 81 43.2
COL.COLO4_22852 Corchorus olitorius HOM05D000003 ORTHO05D002259 5.2e-06 55.1 103 34.0


User provided reference genes

Program Settings