Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 6.0e-67 257.3 124 100.0
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 4.3e-41 171.4 130 69.2
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 2.5e-36 155.6 112 71.4
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 4.7e-35 151.4 131 63.4
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.1e-33 146.7 131 61.8
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.8e-32 142.1 122 62.3
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 6.5e-29 131.0 125 60.8
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.2e-28 128.6 125 60.0
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 5.5e-28 127.9 125 59.2
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 2.1e-19 99.4 96 58.3
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 4.7e-19 98.2 96 57.3
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 1.5e-17 93.2 95 53.7
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 4.8e-16 88.2 84 57.1
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 6.3e-16 87.8 95 55.8
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 6.3e-16 87.8 116 47.4
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 8.3e-16 87.4 102 52.0
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.8e-15 86.3 94 56.4
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 3.1e-15 85.5 108 51.9
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 4.1e-15 85.1 118 47.5
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 5.4e-15 84.7 76 56.6
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.6e-14 83.2 99 50.5
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 4.5e-14 81.6 132 41.7
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 5.9e-14 81.3 93 49.5
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 7.7e-14 80.9 115 50.4
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.0e-13 80.5 110 47.3
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.3e-13 80.1 112 47.3
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.3e-13 80.1 112 47.3
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 1.7e-13 79.7 77 53.2
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 2.9e-13 79.0 116 44.8
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 3.8e-13 78.6 103 47.6
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 5.0e-13 78.2 48 77.1
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.1e-12 77.0 131 45.0
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 2.5e-12 75.9 135 42.2
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 2.5e-12 75.9 85 49.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 4.2e-12 75.1 131 40.5
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 5.5e-12 74.7 67 58.2
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 9.4e-12 73.9 79 55.7
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.2e-11 73.6 92 53.3
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.2e-11 73.6 92 53.3
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.2e-11 73.6 49 69.4
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 1.6e-11 73.2 105 47.6
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.6e-11 73.2 85 49.4
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 2.7e-11 72.4 80 51.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 2.7e-11 72.4 105 47.6
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 2.7e-11 72.4 85 48.2
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 2.7e-11 72.4 85 48.2
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 6.1e-11 71.2 121 42.1
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 8.0e-11 70.9 102 45.1
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.0e-10 70.5 100 45.0
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.4e-10 70.1 113 42.5
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.4e-10 70.1 95 50.5
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 1.8e-10 69.7 73 57.5
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 2.3e-10 69.3 72 50.0
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 2.3e-10 69.3 70 54.3
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 3.0e-10 68.9 101 40.6
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 4.0e-10 68.6 123 40.7
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 4.0e-10 68.6 96 44.8
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.2e-09 67.0 94 45.7
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 1.2e-09 67.0 39 74.4
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.5e-09 66.6 72 55.6
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 2.0e-09 66.2 78 44.9
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 2.6e-09 65.9 45 60.0
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 4.4e-09 65.1 127 37.0
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 4.4e-09 65.1 113 43.4
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 5.7e-09 64.7 75 52.0
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 7.5e-09 64.3 71 54.9
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 1.3e-08 63.5 109 39.4
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.7e-08 63.2 47 57.4
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 2.2e-08 62.8 47 57.4
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.8e-08 62.4 131 38.2
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 3.7e-08 62.0 91 45.1
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 6.3e-08 61.2 48 58.3
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 8.3e-08 60.8 48 58.3
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 8.3e-08 60.8 48 58.3
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.4e-07 59.3 96 38.5
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 5.4e-07 58.2 47 53.2
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 5.4e-07 58.2 47 53.2
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.2e-06 57.0 121 37.2
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 2.0e-06 56.2 90 42.2
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 5.9e-06 54.7 131 35.1
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 5.9e-06 54.7 52 57.7
BcaB06g25688 Brassica carinata HOM05D000020 ORTHO05D001963 7.7e-06 54.3 44 52.3


User provided reference genes

Program Settings