Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 3.7e-79 298.1 148 100.0
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 1.5e-77 292.7 148 96.6
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 1.3e-76 289.7 148 95.3
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.3e-76 289.7 148 96.6
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 5.5e-75 284.3 148 95.3
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 2.7e-74 282.0 148 89.9
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 6.1e-74 280.8 148 90.5
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 6.1e-74 280.8 148 89.9
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 90.5
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 7.9e-74 280.4 147 90.5
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 90.5
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 89.9
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 1.4e-73 279.6 148 89.2
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 1.8e-73 279.3 148 89.2
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 2.3e-73 278.9 148 89.2
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 89.9
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 89.9
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 90.5
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 91.2
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 3.9e-73 278.1 148 90.5
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 3.9e-73 278.1 148 91.9
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 3.9e-73 278.1 148 88.5
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 3.9e-73 278.1 148 88.5
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 6.7e-73 277.3 146 91.8
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 8.8e-73 276.9 146 91.8
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 8.8e-73 276.9 148 89.2
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 91.2
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 89.9
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 87.2
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 89.9
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 88.5
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 88.5
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 89.2
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 2.6e-72 275.4 148 88.5
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 2.6e-72 275.4 148 88.5
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 87.8
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 87.8
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 87.8
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 88.5
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 89.2
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 87.8
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 9.7e-72 273.5 148 87.2
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 1.3e-71 273.1 146 90.4
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 1.3e-71 273.1 148 87.2
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 1.7e-71 272.7 148 87.2
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 3.7e-71 271.6 147 87.8
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 3.7e-71 271.6 148 86.5
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 3.7e-71 271.6 148 86.5
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 4.8e-71 271.2 146 87.7
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 4.8e-71 271.2 148 86.5
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 8.2e-71 270.4 148 86.5
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 8.2e-71 270.4 146 88.4
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 85.8
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 87.2
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 87.2
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 87.2
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 1.4e-70 269.6 148 85.8
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 1.8e-70 269.2 148 85.8
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 3.1e-70 268.5 146 86.3
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 5.3e-70 267.7 148 85.1
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 5.3e-70 267.7 148 83.8
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 5.3e-70 267.7 148 83.8
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 9.1e-70 266.9 148 83.1
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 9.1e-70 266.9 148 86.5
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.2e-69 266.5 168 79.2
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.2e-69 266.5 148 85.8
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 1.5e-69 266.2 146 84.2
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 1.5e-69 266.2 146 84.2
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 2.0e-69 265.8 148 86.5
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 2.0e-69 265.8 148 86.5
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 2.0e-69 265.8 146 86.3
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 2.6e-69 265.4 146 83.6
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 3.4e-69 265.0 148 85.8
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 3.4e-69 265.0 146 87.0
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 3.4e-69 265.0 147 85.7
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 4.5e-69 264.6 146 83.6
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 4.5e-69 264.6 148 85.8
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 4.5e-69 264.6 148 83.1
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 5.9e-69 264.2 148 83.1
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 2.2e-68 262.3 148 82.4
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 2.2e-68 262.3 148 82.4
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 5.0e-68 261.2 148 84.5
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 6.5e-68 260.8 148 82.4
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.1e-67 260.0 148 81.8
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 5.5e-67 257.7 146 83.6
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 4.7e-66 254.6 139 87.1
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 1.1e-64 250.0 130 90.8
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 2.0e-64 249.2 158 74.7
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.0e-64 249.2 148 77.7
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 7.4e-64 247.3 148 78.4
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 1.7e-63 246.1 140 83.6
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 3.7e-63 245.0 133 85.7
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 1.1e-62 243.4 135 85.2
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 4.1e-62 241.5 144 77.1
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 9.1e-62 240.4 124 96.0
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.6e-61 238.8 144 75.7
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 7.7e-61 237.3 198 61.1
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 1.3e-60 236.5 129 85.3
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 5.0e-60 234.6 124 91.1
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 5.0e-60 234.6 124 91.1
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 1.9e-59 232.6 124 90.3
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.9e-59 232.6 123 90.2
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 7.2e-59 230.7 148 73.0
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 4.7e-58 228.0 146 71.9
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.4e-57 226.5 122 89.3
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 3.0e-57 225.3 124 86.3
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 5.2e-57 224.6 146 71.2
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 5.2e-57 224.6 124 83.9
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 5.7e-56 221.1 130 84.6
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 8.2e-55 217.2 124 80.6
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 1.6e-53 213.0 130 76.2
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.5e-53 211.8 130 76.9
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 1.0e-52 210.3 146 67.1
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 1.1e-51 206.8 121 78.5
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 2.5e-51 205.7 148 66.9
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 3.6e-50 201.8 145 66.2
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 8.0e-50 200.7 116 83.6
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 9.8e-48 193.7 146 58.2
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 7.7e-45 184.1 148 68.2
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.1e-43 180.3 148 67.6
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 3.3e-43 178.7 113 76.1
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 3.0e-41 172.2 117 73.5
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 1.3e-39 166.8 148 58.8
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 3.7e-39 165.2 143 55.9
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 4.5e-37 158.3 84 91.7
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 7.8e-37 157.5 119 65.5
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 2.5e-35 152.5 82 90.2
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.2e-34 150.2 89 86.5
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 1.9e-27 126.3 152 48.7
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.3e-23 113.6 86 65.1
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.1e-22 110.5 65 84.6
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 1.6e-21 106.7 58 87.9
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.5e-21 105.5 128 52.3
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.8e-21 104.4 63 77.8
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 1.3e-20 103.6 60 81.7
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.7e-20 103.2 63 76.2
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.1e-18 94.4 50 90.0
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 4.0e-17 92.0 152 35.5
TPR.G29435 Trifolium pratense HOM05D004884 ORTHO05D005873 8.9e-17 90.9 46 91.3
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 1.5e-16 90.1 140 34.3
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 1.1e-14 84.0 143 35.0
CAN.G185.10 Capsicum annuum HOM05D004884 ORTHO05D005873 1.8e-09 66.6 64 56.2


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