Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G017700 Theobroma cacao HOM05D008164 ORTHO05D010222 5.9e-94 347.4 166 100.0
Duzib235G0793 Durio zibethinus HOM05D008164 ORTHO05D010222 2.1e-54 216.1 179 69.8
Gohir.A05G110000 Gossypium hirsutum HOM05D008164 ORTHO05D010222 1.7e-40 169.9 171 56.7
CiPaw.05G001800 Carya illinoinensis HOM05D008164 ORTHO05D010222 1.1e-36 157.1 161 57.8
Haze_09987 Corylus avellana HOM05D008164 ORTHO05D010222 3.3e-36 155.6 164 54.9
Cfa004447 Carpinus fangiana HOM05D008164 ORTHO05D010222 5.6e-36 154.8 165 51.5
Gohir.D05G110300 Gossypium hirsutum HOM05D008164 ORTHO05D010222 5.3e-34 148.3 167 53.9
Gorai.009G114500 Gossypium raimondii HOM05D008164 ORTHO05D010222 5.3e-34 148.3 167 53.9
Dinv29630 Davidia involucrata HOM05D000112 ORTHO05D000564 3.9e-29 132.1 166 48.8
QL02p103286 Quercus lobata HOM05D008164 ORTHO05D010222 1.5e-28 130.2 179 49.2
TAR628G0422 Trochodendron aralioides HOM05D008164 ORTHO05D010222 1.1e-26 124.0 160 50.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.4e-26 123.6 150 52.7
Ciclev10002734m.g Citrus clementina HOM05D008164 ORTHO05D010222 5.3e-26 121.7 176 46.6
Potri.003G001200 Populus trichocarpa HOM05D008164 ORTHO05D010222 1.2e-25 120.6 164 48.2
Manes.10G108200 Manihot esculenta HOM05D008164 ORTHO05D010222 1.7e-24 116.7 165 44.2
Prupe.1G585100 Prunus persica HOM05D008164 ORTHO05D010222 3.8e-24 115.5 186 42.5
DCAR_003281 Daucus carota HOM05D008164 ORTHO05D010222 8.4e-24 114.4 167 43.7
TWI14G0748 Tripterygium wilfordii HOM05D008164 ORTHO05D010222 1.4e-23 113.6 167 43.7
PSO017G5192 Papaver somniferum HOM05D008164 ORTHO05D010222 1.2e-22 110.5 167 43.7
Atru.chr6.245 Acer truncatum HOM05D008164 ORTHO05D010222 1.6e-22 110.2 184 42.9
CARHR231690 Cardamine hirsuta HOM05D008164 ORTHO05D010222 2.5e-20 102.8 154 42.2
Cpa.g.sc173.36 Carica papaya HOM05D008164 ORTHO05D010222 1.6e-19 100.1 158 43.0
Sp7g22250 Schrenkiella parvula HOM05D008164 ORTHO05D010222 3.7e-19 99.0 164 39.0
Cpa.g.sc173.26 Carica papaya HOM05D008164 ORTHO05D010222 4.8e-19 98.6 156 42.9
Cc02_g23560 Coffea canephora HOM05D008164 ORTHO05D010222 4.1e-18 95.5 171 39.2
Aqoxy7G02312 Aquilegia oxysepala HOM05D008164 ORTHO05D010222 6.9e-18 94.7 175 38.9
PGR142G0304 Punica granatum HOM05D008164 ORTHO05D010222 6.9e-18 94.7 130 40.8
ATR0580G429 Amborella trichopoda HOM05D008164 ORTHO05D010222 9.0e-18 94.4 162 37.7
Cpa.g.sc173.30 Carica papaya HOM05D008164 ORTHO05D010222 9.0e-18 94.4 156 42.9
Thhalv10026492m.g Eutrema salsugineum HOM05D008164 ORTHO05D010222 1.5e-17 93.6 165 39.4
BcaNung01134 Brassica carinata HOM05D008164 ORTHO05D010222 2.0e-17 93.2 165 39.4
BcaC09g50889 Brassica carinata HOM05D008164 ORTHO05D010222 2.6e-17 92.8 166 39.2
C01p19540 Brassica napus HOM05D008164 ORTHO05D010222 2.6e-17 92.8 166 39.2
Lj5P282T61 Lonicera japonica HOM05D008164 ORTHO05D010222 2.6e-17 92.8 177 36.7
BraA01t01499Z Brassica rapa HOM05D008164 ORTHO05D010222 5.9e-17 91.7 166 37.3
Sc23g0003940 Simmondsia chinensis HOM05D008164 ORTHO05D010222 7.7e-17 91.3 172 38.4
AL7G28990 Arabidopsis lyrata HOM05D008164 ORTHO05D010222 1.0e-16 90.9 155 41.3
A01p15590 Brassica napus HOM05D008164 ORTHO05D010222 1.0e-16 90.9 166 37.3
Sopen01g045480 Solanum pennellii HOM05D008164 ORTHO05D010222 1.0e-16 90.9 167 38.9
BcaC09g50645 Brassica carinata HOM05D008164 ORTHO05D010222 1.3e-16 90.5 171 37.4
C01p22560 Brassica napus HOM05D008164 ORTHO05D010222 1.3e-16 90.5 171 37.4
BolC1t02189H Brassica oleracea HOM05D008164 ORTHO05D010222 1.3e-16 90.5 171 37.4
Solyc01g103070.2 Solanum lycopersicum HOM05D008164 ORTHO05D010222 1.3e-16 90.5 167 38.9
BolC1t01882H Brassica oleracea HOM05D008164 ORTHO05D010222 2.2e-16 89.7 166 39.2
AT4G24265 Arabidopsis thaliana HOM05D008164 ORTHO05D010222 1.1e-15 87.4 160 40.0
Rhsim11G0118100 Rhododendron simsii HOM05D008164 ORTHO05D010222 1.9e-15 86.7 159 37.1
Oeu043611.1 Olea europaea HOM05D008164 ORTHO05D010222 3.2e-15 85.9 162 37.7
PSO478G3084 Papaver somniferum HOM05D008164 ORTHO05D010222 3.2e-15 85.9 145 41.4
PGSC0003DMG400038752 Solanum tuberosum HOM05D008164 ORTHO05D010222 3.2e-15 85.9 159 35.8
Peaxi162Scf00011g00188 Petunia axillaris HOM05D008164 ORTHO05D010222 7.2e-15 84.7 163 37.4
Carub.0007s1679 Capsella rubella HOM05D008164 ORTHO05D010222 2.7e-14 82.8 188 36.7
FvH4_5g28060 Fragaria vesca HOM05D008164 ORTHO05D010222 1.0e-13 80.9 171 38.0
TAR376G0048 Trochodendron aralioides HOM05D008164 ORTHO05D010222 1.4e-13 80.5 160 38.1
FAN04G0245 Fragaria x ananassa HOM05D008164 ORTHO05D010222 3.0e-13 79.3 169 37.9
Manes.07G030300 Manihot esculenta HOM05D008164 ORTHO05D010222 5.1e-13 78.6 159 36.5
Glyma.12G164000 Glycine max HOM05D008164 ORTHO05D010222 1.1e-12 77.4 160 38.8
FAN18G4000 Fragaria x ananassa HOM05D008164 ORTHO05D010222 2.5e-12 76.3 175 36.6
Migut.N00863 Erythranthe guttata HOM05D008164 ORTHO05D010222 3.3e-12 75.9 168 35.1
Nitab4.5_0004668g0050 Nicotiana tabacum HOM05D008164 ORTHO05D010222 1.3e-11 73.9 153 37.9
Cpa.g.c34058.1 Carica papaya HOM05D008164 ORTHO05D010222 2.8e-11 72.8 137 40.1
Lsat_1_v5_gn_9_121861 Lactuca sativa HOM05D008164 ORTHO05D010222 4.8e-11 72.0 173 35.3
Cpa.g.sc173.33 Carica papaya HOM05D008164 ORTHO05D010222 6.3e-11 71.6 135 40.7
Cpa.g.sc173.39 Carica papaya HOM05D008164 ORTHO05D010222 6.3e-11 71.6 135 40.0
FAN08G3488 Fragaria x ananassa HOM05D008164 ORTHO05D010222 2.4e-10 69.7 89 47.2
arahy.Tifrunner.gnm1.ann1.S0ITFJ Arachis hypogaea HOM05D037561 ORTHO05D010222 1.2e-09 67.4 134 35.1
Phvul.006G221400 Phaseolus vulgaris HOM05D045043 ORTHO05D010222 3.4e-09 65.9 165 35.2
Nitab4.5_0008306g0040 Nicotiana tabacum HOM05D008164 ORTHO05D010222 2.5e-07 59.7 142 34.5
MELO3C022933.2 Cucumis melo HOM05D051489 ORTHO05D044912 1.2e-06 57.4 157 32.5
Eucgr.I02795 Eucalyptus grandis HOM05D008164 ORTHO05D010222 1.2e-06 57.4 190 26.3
SGA_v2.0_scaffold8G04458 Striga asiatica HOM05D008164 ORTHO05D010222 2.7e-06 56.2 176 27.3
CsaV3_5G015690 Cucumis sativus L. HOM05D051489 ORTHO05D044912 6.1e-06 55.1 118 33.1


User provided reference genes

Program Settings