Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.1e-182 643.3 359 100.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 9.3e-153 543.9 359 86.4
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-152 543.5 359 86.1
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.4e-132 476.9 359 76.6
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 3.0e-127 459.1 358 74.6
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.8e-125 451.8 274 88.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 4.1e-124 448.7 361 73.1
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 5.3e-124 448.4 361 73.1
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.1e-121 440.7 359 72.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 2.1e-120 436.4 362 73.2
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.4e-119 433.7 346 69.1
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.4e-116 423.7 363 66.1
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.4e-116 422.9 361 67.9
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 4.1e-116 422.2 359 71.9
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.6e-115 420.2 346 68.5
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.6e-115 420.2 355 68.7
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 2.2e-114 416.4 336 67.6
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.9e-114 416.0 346 67.9
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-113 414.1 346 67.6
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.5e-113 413.7 358 65.9
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.9e-113 413.3 359 67.1
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.0e-111 407.5 338 73.4
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.0e-111 406.0 339 69.3
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 3.0e-111 406.0 361 67.0
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 8.8e-111 404.4 376 66.5
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 5.7e-110 401.7 359 63.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.7e-109 399.1 360 63.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.1e-108 397.5 363 65.6
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 1.8e-108 396.7 379 65.2
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.2e-107 394.0 400 59.5
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.6e-107 393.7 330 67.6
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.7e-107 392.9 377 65.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 8.6e-106 387.9 314 72.0
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.2e-105 385.6 362 63.8
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 4.2e-105 385.6 359 63.8
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 9.5e-105 384.4 353 65.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 3.6e-104 382.5 362 66.6
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 6.1e-104 381.7 366 60.1
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.4e-103 380.6 405 62.0
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.3e-103 379.8 359 59.9
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 3.0e-103 379.4 371 59.8
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.0e-103 379.4 360 64.2
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 8.9e-103 377.9 374 59.6
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.2e-102 377.5 357 63.9
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 4.4e-102 375.6 366 60.1
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.3e-101 374.0 359 63.8
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 3.7e-101 372.5 337 70.6
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 4.9e-101 372.1 390 57.9
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 8.3e-101 371.3 296 72.0
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.1e-100 370.9 368 60.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.8e-100 370.2 368 60.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.6e-99 367.1 363 59.8
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 2.7e-99 366.3 369 64.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 4.5e-99 365.5 371 61.7
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 7.8e-99 364.8 363 59.8
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 7.8e-99 364.8 363 59.8
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.3e-98 364.0 363 59.5
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.3e-98 364.0 350 62.0
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 5.0e-98 362.1 374 58.3
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.9e-97 360.1 359 61.0
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 3.3e-97 359.4 361 60.7
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.2e-96 357.5 379 59.9
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 5.2e-95 352.1 354 61.3
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 7.5e-94 348.2 371 55.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.7e-93 347.1 352 60.2
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.7e-93 347.1 360 60.6
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.1e-92 344.4 360 61.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 4.6e-91 339.0 337 60.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 6.0e-91 338.6 379 59.6
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.5e-89 333.2 362 57.7
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.3e-89 332.8 299 69.2
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.3e-89 332.8 375 56.5
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 9.5e-89 331.3 355 60.3
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 6.2e-88 328.6 408 55.6
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 2.3e-87 326.6 349 60.7
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 4.4e-86 322.4 356 59.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.1e-84 317.8 360 55.6
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.2e-83 314.3 359 54.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 6.6e-82 308.5 297 64.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.2e-80 304.3 365 51.5
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.7e-80 302.4 366 51.4
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.2e-78 297.7 375 53.9
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.2e-78 297.7 360 50.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 3.2e-76 289.7 266 69.2
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.2e-76 289.7 357 55.7
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 5.4e-76 288.9 350 51.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 7.8e-75 285.0 367 50.4
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.3e-74 284.3 399 51.6
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.7e-72 275.8 373 49.9
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.0e-70 270.4 380 49.2
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.7e-69 267.3 331 57.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.0e-66 258.1 361 52.9
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 5.6e-65 252.3 307 56.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.0e-62 243.8 341 45.7
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.0e-58 231.5 296 55.1
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.5e-57 226.9 171 76.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.0e-54 217.2 260 58.8
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 2.0e-54 217.2 358 47.2
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.8e-54 215.7 273 53.8
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.7e-53 214.2 194 68.0
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 4.2e-52 209.5 273 49.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.6e-51 206.1 411 42.1
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 7.9e-51 205.3 272 46.7
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.4e-47 194.5 189 57.1
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.4e-44 184.5 341 44.6
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 2.3e-42 177.2 115 82.6
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.3e-39 166.0 148 58.8
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 4.8e-32 142.9 196 55.1
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 8.5e-29 132.1 173 56.6
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.4e-28 131.3 173 55.5
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.2e-20 103.6 69 85.5
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 4.2e-20 103.2 69 79.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 5.5e-20 102.8 62 85.5
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 5.1e-18 96.3 310 33.9
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 6.7e-18 95.9 301 35.2
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 9.1e-15 85.5 87 63.2
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.0e-09 67.8 36 83.3
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.7e-08 63.5 134 41.0
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 7.7e-06 55.8 279 28.0


User provided reference genes

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