Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.06G008700 Theobroma cacao HOM05D000275 ORTHO05D010802 5.9e-46 187.2 96 100.0
Thecc.06G008800 Theobroma cacao HOM05D000275 ORTHO05D010802 6.3e-40 167.2 95 92.6
Gorai.009G117000 Gossypium raimondii HOM05D000275 ORTHO05D010802 1.4e-34 149.4 95 80.0
Gohir.A05G112400 Gossypium hirsutum HOM05D000275 ORTHO05D010802 2.6e-33 145.2 95 77.9
Manes.06G051500 Manihot esculenta HOM05D000275 ORTHO05D010802 2.6e-33 145.2 95 78.9
COL.COLO4_26881 Corchorus olitorius HOM05D000275 ORTHO05D010802 7.5e-33 143.7 95 78.9
Gohir.D05G112800 Gossypium hirsutum HOM05D000275 ORTHO05D010802 7.5e-33 143.7 95 77.9
COL.COLO4_26882 Corchorus olitorius HOM05D000275 ORTHO05D010802 9.8e-33 143.3 89 84.3
Duzib160G0260 Durio zibethinus HOM05D000275 ORTHO05D010802 6.4e-32 140.6 95 78.9
Manes.14G126100 Manihot esculenta HOM05D000275 ORTHO05D010802 6.4e-32 140.6 95 73.7
Manes.06G051600 Manihot esculenta HOM05D000275 ORTHO05D010802 1.4e-31 139.4 95 74.7
Ciclev10018033m.g Citrus clementina HOM05D000275 ORTHO05D010802 5.4e-31 137.5 95 71.6
Cpa.g.sc489.7 Carica papaya HOM05D000275 ORTHO05D010802 4.6e-30 134.4 96 74.0
Actinidia29298 Actinidia chinensis HOM05D000275 ORTHO05D010802 6.0e-30 134.0 93 73.1
Gohir.A05G112300 Gossypium hirsutum HOM05D000275 ORTHO05D010802 1.0e-29 133.3 95 73.7
Gohir.D05G112700 Gossypium hirsutum HOM05D000275 ORTHO05D010802 1.0e-29 133.3 88 77.3
Gorai.009G116900 Gossypium raimondii HOM05D000275 ORTHO05D010802 1.7e-29 132.5 88 77.3
Cpa.g.c30210.2 Carica papaya HOM05D000275 ORTHO05D010802 3.3e-28 128.3 88 75.0
Hma1.2p1_0071F.1_g037800 Hydrangea macrophylla HOM05D000275 ORTHO05D010802 7.3e-28 127.1 96 70.8
TAR624G0945 Trochodendron aralioides HOM05D000275 ORTHO05D010802 9.5e-28 126.7 96 71.9
Nitab4.5_0016619g0010 Nicotiana tabacum HOM05D000275 ORTHO05D010802 2.1e-27 125.6 95 69.5
Oeu000504.1 Olea europaea HOM05D000275 ORTHO05D010802 3.6e-27 124.8 96 66.7
Nitab4.5_0004734g0020 Nicotiana tabacum HOM05D000275 ORTHO05D010802 1.4e-26 122.9 96 66.7
Peaxi162Scf00395g00012 Petunia axillaris HOM05D000275 ORTHO05D010802 2.3e-26 122.1 96 66.7
TWI32G0556 Tripterygium wilfordii HOM05D000275 ORTHO05D010802 2.3e-26 122.1 96 66.7
GSVIVG01021772001 Vitis vinifera HOM05D000275 ORTHO05D010802 2.3e-26 122.1 96 67.7
Oeu063154.1 Olea europaea HOM05D000275 ORTHO05D010802 6.8e-26 120.6 96 64.6
Dinv06441 Davidia involucrata HOM05D000275 ORTHO05D010802 2.0e-25 119.0 96 65.6
Nitab4.5_0004734g0010 Nicotiana tabacum HOM05D000275 ORTHO05D010802 2.0e-25 119.0 96 66.7
Nitab4.5_0002819g0020 Nicotiana tabacum HOM05D000275 ORTHO05D010802 2.6e-25 118.6 96 64.6
Cc09_g07350 Coffea canephora HOM05D000275 ORTHO05D010802 3.4e-25 118.2 97 67.0
TWI60G0148 Tripterygium wilfordii HOM05D000275 ORTHO05D010802 4.9e-24 114.4 96 62.5
SGA_v2.0_scaffold223G42879 Striga asiatica HOM05D000275 ORTHO05D010802 3.2e-23 111.7 90 63.3
Migut.M01927 Erythranthe guttata HOM05D000275 ORTHO05D010802 9.2e-23 110.2 96 61.5
THA.LOC104812117 Tarenaya hassleriana HOM05D000275 ORTHO05D010802 2.7e-22 108.6 91 60.4
DCAR_007816 Daucus carota HOM05D000275 ORTHO05D010802 7.8e-22 107.1 96 58.3
Rhsim13G0125200 Rhododendron simsii HOM05D000275 ORTHO05D010802 1.7e-21 105.9 88 61.4
SGA_v2.0_scaffold51G18665 Striga asiatica HOM05D000275 ORTHO05D010802 3.0e-21 105.1 94 58.5
DCAR_005642 Daucus carota HOM05D000275 ORTHO05D010802 2.5e-20 102.1 96 54.2
Eucgr.K01972 Eucalyptus grandis HOM05D000275 ORTHO05D010802 2.1e-19 99.0 96 58.3
Eucgr.L01665 Eucalyptus grandis HOM05D000275 ORTHO05D010802 2.1e-19 99.0 96 58.3
Potri.001G460801 Populus trichocarpa HOM05D000275 ORTHO05D010802 2.0e-17 92.4 63 71.4
TWI81G0310 Tripterygium wilfordii HOM05D000275 ORTHO05D010802 9.9e-17 90.1 81 64.2
PGR083G1828 Punica granatum HOM05D000275 ORTHO05D010802 6.4e-16 87.4 97 52.6
MBI18_g27138_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D010802 3.3e-12 75.1 96 43.8
SEGI_30007 Sequoiadendron giganteum HOM05D000275 ORTHO05D000181 2.9e-08 62.0 75 41.3
SEGI_32690 Sequoiadendron giganteum HOM05D000275 ORTHO05D000181 1.1e-07 60.1 87 35.6
Potri.014G046500 Populus trichocarpa HOM05D000275 ORTHO05D000181 3.2e-07 58.5 97 35.1
Duzib268G1181 Durio zibethinus HOM05D000275 ORTHO05D000181 4.2e-07 58.2 90 34.4
Sed0020486 Sechium edule HOM05D000275 ORTHO05D000181 4.2e-07 58.2 87 33.3
AUR62006385 Chenopodium quinoa HOM05D000275 ORTHO05D000181 5.4e-07 57.8 86 37.2
Zm00001eb406130 Zea mays HOM05D000275 ORTHO05D000181 5.4e-07 57.8 79 39.2
Medtr2g062600 Medicago truncatula HOM05D000275 ORTHO05D000181 7.1e-07 57.4 84 35.7
Lj3g0012102 Lotus japonicus HOM05D000275 ORTHO05D000181 9.3e-07 57.0 90 34.4
Lj3g0025801 Lotus japonicus HOM05D000275 ORTHO05D000181 9.3e-07 57.0 90 34.4
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 9.3e-07 57.0 75 38.7
Migut.B01539 Erythranthe guttata HOM05D000275 ORTHO05D000181 1.2e-06 56.6 85 35.3
Peaxi162Scf01343g00142 Petunia axillaris HOM05D000275 ORTHO05D000181 1.2e-06 56.6 90 31.1
Psat1g130320 Pisum sativum HOM05D000275 ORTHO05D000181 1.2e-06 56.6 95 30.5
Ca_03265_v3 Cicer arietinum L. HOM05D000275 ORTHO05D000181 1.6e-06 56.2 84 29.8
Glyma.15G265900 Glycine max HOM05D000275 ORTHO05D000181 1.6e-06 56.2 89 29.2
Lalb_Chr06g0169701 Lupinus albus HOM05D000275 ORTHO05D000181 1.6e-06 56.2 85 36.5
Dinv43951 Davidia involucrata HOM05D000275 ORTHO05D000181 2.1e-06 55.8 87 32.2
Carub.0003s3252 Capsella rubella HOM05D000275 ORTHO05D000181 2.7e-06 55.5 73 35.6
Phvul.005G045100 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.7e-06 55.5 84 29.8
EL10Ac9g21666 Beta vulgaris HOM05D000275 ORTHO05D000181 3.5e-06 55.1 86 34.9
CARHR083060 Cardamine hirsuta HOM05D000275 ORTHO05D000181 3.5e-06 55.1 85 37.6
Ciclev10033516m.g Citrus clementina HOM05D000275 ORTHO05D000181 3.5e-06 55.1 91 34.1
Manes.02G187100 Manihot esculenta HOM05D000275 ORTHO05D000181 3.5e-06 55.1 81 35.8
Ah.08g209540 Amaranthus hybridus HOM05D000275 ORTHO05D000181 4.6e-06 54.7 70 41.4
Zm00001eb163880 Zea mays HOM05D000275 ORTHO05D000181 4.6e-06 54.7 67 37.3
Ah.08g209500 Amaranthus hybridus HOM05D000275 ORTHO05D000181 6.0e-06 54.3 71 36.6
ATR1098G150 Amborella trichopoda HOM05D000275 ORTHO05D000181 6.0e-06 54.3 96 31.2
AUR62029724 Chenopodium quinoa HOM05D000275 ORTHO05D000181 6.0e-06 54.3 78 37.2
Potri.009G025200 Populus trichocarpa HOM05D000275 ORTHO05D000181 6.0e-06 54.3 78 34.6
RcHm_v2.0_Chr1g0347601 Rosa chinensis HOM05D000275 ORTHO05D000181 7.8e-06 53.9 81 34.6


User provided reference genes

Program Settings