Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.6e-191 671.4 331 100.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 8.9e-166 587.0 331 87.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 5.4e-163 577.8 331 85.5
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 2.6e-157 558.9 331 84.0
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.2e-156 555.8 331 84.0
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.8e-149 530.4 318 82.7
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.3e-140 503.4 343 74.3
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.4e-139 500.0 346 73.7
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 5.4e-139 498.0 337 73.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 5.4e-139 498.0 346 73.7
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 5.4e-139 498.0 346 73.4
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 6.6e-137 491.1 336 72.6
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 9.6e-136 487.3 336 72.9
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 8.1e-135 484.2 345 71.9
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.8e-134 483.0 335 71.9
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.5e-133 479.9 343 70.8
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 2.2e-132 476.1 335 70.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 4.9e-132 474.9 338 72.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.0e-129 465.7 336 69.6
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 6.6e-129 464.5 335 69.0
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.5e-128 462.6 337 67.7
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 2.8e-127 459.1 340 68.8
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 2.8e-127 459.1 324 69.1
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.8e-127 458.4 338 68.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 8.1e-127 457.6 340 68.2
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 4.0e-126 455.3 341 66.9
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 6.9e-126 454.5 349 65.9
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 9.0e-126 454.1 340 66.2
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.5e-125 453.4 364 65.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.0e-125 453.0 340 67.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 5.8e-125 451.4 340 66.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 9.9e-125 450.7 331 69.2
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 9.9e-125 450.7 341 67.7
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.2e-124 449.5 358 65.4
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.8e-124 448.7 336 65.8
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.9e-124 448.4 336 66.4
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 6.4e-124 448.0 339 67.3
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.1e-123 447.2 331 67.4
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.9e-123 446.4 335 66.3
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 4.2e-123 445.3 341 66.0
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 5.4e-123 444.9 349 65.6
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 5.4e-123 444.9 330 66.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 7.1e-123 444.5 332 66.6
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.2e-122 443.7 333 65.8
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.6e-122 443.4 359 64.3
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 3.5e-122 442.2 342 65.8
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 3.5e-122 442.2 337 64.7
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 4.6e-122 441.8 341 64.2
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 4.6e-122 441.8 340 67.1
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 6.0e-122 441.4 340 67.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.0e-121 440.7 347 64.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.0e-121 440.7 306 73.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.0e-121 440.7 309 68.6
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.0e-121 440.7 326 67.8
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 3.0e-121 439.1 342 63.7
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 6.6e-121 438.0 331 64.0
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 8.7e-121 437.6 319 66.1
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-120 436.4 331 63.7
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.5e-120 436.0 315 71.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 3.3e-120 435.6 334 66.2
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 5.6e-120 434.9 322 65.8
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.6e-119 433.3 341 63.9
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 2.1e-119 433.0 291 69.4
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.8e-119 431.8 310 67.7
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.4e-118 429.5 318 64.5
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.4e-118 429.5 319 64.6
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.1e-118 429.1 299 67.2
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 3.4e-117 425.6 329 64.1
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 4.5e-117 425.2 344 63.4
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.2e-116 422.9 339 64.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.9e-116 422.5 341 63.6
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.9e-116 422.5 307 66.1
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 4.9e-116 421.8 344 64.0
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 9.3e-115 417.5 342 63.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 9.3e-115 417.5 342 63.7
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.6e-114 416.8 340 62.9
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.1e-114 416.4 343 61.2
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.5e-114 415.6 296 71.3
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.8e-113 413.3 349 61.3
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.3e-113 412.9 311 65.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 2.3e-113 412.9 348 62.6
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 5.6e-112 408.3 324 64.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.4e-112 407.9 314 65.6
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 7.4e-112 407.9 282 69.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.2e-109 400.6 339 60.2
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.2e-109 400.6 340 60.9
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 6.5e-108 394.8 321 62.9
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 7.1e-107 391.3 301 65.8
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.7e-106 389.4 299 64.2
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.5e-101 373.6 264 64.0
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 5.9e-101 371.7 290 63.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 8.4e-100 367.9 306 57.5
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.4e-99 367.1 215 77.7
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 6.7e-97 358.2 275 66.5
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.3e-96 355.9 320 58.4
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 7.4e-96 354.8 268 63.4
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.3e-95 354.0 269 63.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 4.1e-94 349.0 346 54.6
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.4e-86 323.2 242 69.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 3.4e-85 319.3 342 51.8
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.4e-85 319.3 332 48.2
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.7e-72 274.6 292 48.6
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 3.7e-71 272.7 296 45.9
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 8.2e-71 271.6 368 41.6
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.4e-70 270.8 224 65.6
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.0e-70 268.5 285 47.7
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 2.3e-65 253.4 238 55.5
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.8e-65 251.5 202 60.9
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.8e-63 245.7 220 60.0
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.6e-58 229.6 297 43.8
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 3.0e-57 226.5 233 45.5
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 7.3e-51 205.3 302 41.1
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.4e-48 196.4 340 36.8
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.9e-45 185.7 160 53.1
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.5e-35 153.7 156 59.0
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 4.3e-35 152.9 175 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.4e-33 147.9 114 58.8
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 7.6e-24 115.5 145 51.0
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.4e-17 94.7 164 43.3
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.7e-12 77.8 42 78.6
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 6.9e-09 65.9 34 82.4
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 9.0e-09 65.5 101 39.6


User provided reference genes

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