Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 5.4e-164 580.9 282 100.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.6e-144 516.2 283 89.4
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.3e-143 511.1 283 88.0
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 4.2e-140 501.5 283 86.2
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-136 489.6 283 85.2
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.1e-136 489.2 283 85.2
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.9e-133 478.0 283 83.4
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.4e-124 449.9 283 79.5
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.5e-118 429.9 281 75.8
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.0e-113 412.9 285 74.7
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 5.9e-110 401.4 285 73.0
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 5.0e-109 398.3 295 71.5
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 9.4e-108 394.0 285 71.6
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.2e-107 393.7 297 70.4
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 3.0e-106 389.0 280 70.7
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 3.3e-105 385.6 285 67.7
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.3e-104 383.6 286 68.2
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 3.7e-104 382.1 291 67.4
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 1.1e-103 380.6 291 67.7
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 3.1e-103 379.0 286 67.8
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 5.3e-103 378.3 286 70.6
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 9.1e-103 377.5 292 66.4
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 9.1e-103 377.5 329 63.5
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.5e-102 376.7 300 65.0
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 3.5e-102 375.6 292 66.1
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 4.5e-102 375.2 299 63.9
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.0e-101 374.0 293 66.2
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.9e-101 372.5 284 67.3
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.5e-101 371.3 290 66.2
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 8.5e-101 370.9 304 64.5
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 8.5e-101 370.9 298 64.4
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.2e-100 368.6 289 65.1
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.5e-100 368.2 297 63.6
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.2e-99 367.1 310 62.9
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 3.6e-99 365.5 287 67.6
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 3.6e-99 365.5 288 65.3
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.4e-98 363.6 296 65.2
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 1.8e-98 363.2 282 66.0
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 5.2e-98 361.7 307 62.9
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 8.8e-98 360.9 282 66.7
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.1e-97 360.5 284 65.5
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.0e-97 359.8 295 64.4
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 7.4e-97 357.8 241 75.9
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 9.7e-97 357.5 281 64.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 3.1e-95 352.4 289 64.4
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 7.0e-95 351.3 292 63.7
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.2e-94 350.5 185 89.2
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 4.5e-94 348.6 290 62.8
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 5.9e-94 348.2 288 65.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 7.7e-94 347.8 284 63.0
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.0e-93 347.4 304 61.5
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 1.3e-93 347.1 283 62.5
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.7e-93 346.7 294 63.3
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 2.9e-93 345.9 298 61.1
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 3.8e-93 345.5 290 62.8
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.1e-92 344.0 287 62.0
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 5.5e-92 341.7 268 67.5
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 9.4e-92 340.9 283 61.8
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.0e-90 337.4 285 61.1
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.4e-90 337.0 300 60.7
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.4e-90 337.0 283 64.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.3e-90 336.3 282 61.0
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.3e-90 336.3 282 61.0
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.3e-90 336.3 282 61.0
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 3.0e-90 335.9 282 61.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 4.0e-90 335.5 273 60.8
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 6.8e-90 334.7 289 61.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 2.0e-89 333.2 285 62.1
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 3.4e-89 332.4 280 60.4
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 7.5e-89 331.3 253 66.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 9.8e-89 330.9 303 59.4
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 3.7e-88 328.9 277 62.1
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 6.3e-88 328.2 276 61.6
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 2.4e-87 326.2 289 58.1
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 3.1e-87 325.9 283 60.4
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.2e-86 323.9 190 81.6
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.0e-85 320.9 334 56.0
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.5e-84 317.0 199 73.4
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 2.5e-84 316.2 190 75.8
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 3.0e-82 309.3 281 59.4
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.0e-82 308.9 281 58.7
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.0e-81 306.6 214 67.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 5.7e-81 305.1 336 51.8
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 7.5e-81 304.7 171 83.6
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.7e-77 293.5 217 71.0
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.5e-76 290.4 156 87.2
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.4e-74 283.9 250 62.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.8e-74 283.5 165 81.2
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.3e-74 283.1 161 85.1
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 2.6e-73 279.6 163 76.7
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 5.7e-73 278.5 287 56.4
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 1.6e-70 270.4 156 83.3
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.9e-69 266.2 170 70.6
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-67 260.8 305 52.1
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 4.9e-64 248.8 148 78.4
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 7.3e-60 235.0 232 56.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.6e-59 232.6 164 65.9
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.3e-56 224.2 196 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.4e-55 219.9 192 54.2
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 4.1e-55 219.2 285 49.1
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 5.4e-55 218.8 190 53.7
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 7.1e-55 218.4 189 53.4
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.1e-50 204.5 231 52.4
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.5e-49 200.7 279 45.2
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 3.7e-48 196.1 187 50.3
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.5e-44 184.1 165 56.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 2.4e-42 176.8 336 37.2
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.4e-39 167.5 206 45.1
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 9.3e-39 164.9 112 71.4
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.3e-35 154.5 201 43.8
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 6.2e-35 152.1 91 74.7
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 7.6e-33 145.2 180 41.1
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 9.3e-23 111.7 97 60.8
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 9.0e-10 68.6 45 73.3
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.0e-08 65.1 133 39.1
Oeu048435.1 Olea europaea HOM05D006942 ORTHO05D008737 3.8e-08 63.2 127 41.7
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 2.5e-07 60.5 64 39.1
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 5.5e-07 59.3 50 56.0


User provided reference genes

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