Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 4.3e-27 124.0 67 100.0
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 6.4e-23 110.2 67 89.6
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 4.6e-21 104.0 73 87.7
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 2.0e-16 88.6 67 76.1
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 3.8e-15 84.3 52 76.9
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 5.5e-14 80.5 58 67.2
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 1.9e-11 72.0 30 90.0
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 1.9e-11 72.0 30 90.0
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 1.9e-11 72.0 30 90.0
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 2.8e-10 68.2 31 83.9
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 6.2e-10 67.0 45 66.7
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 1.1e-09 66.2 44 79.5
FAN05G5084 Fragaria x ananassa HOM05D010912 ORTHO05D009926 5.3e-09 63.9 65 52.3
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 4.5e-08 60.8 58 58.6
FvH4_6g04120 Fragaria vesca HOM05D010912 ORTHO05D009926 7.6e-08 60.1 74 48.6
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 7.6e-08 60.1 33 72.7
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 1.0e-07 59.7 52 59.6
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 1.3e-07 59.3 28 75.0
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 1.3e-07 59.3 26 80.8
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 1.7e-07 58.9 75 50.7
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 2.2e-07 58.5 87 42.5
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 2.9e-07 58.2 79 45.6
Sc16g0008190 Simmondsia chinensis HOM05D010912 ORTHO05D009926 8.4e-07 56.6 25 76.0
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 1.4e-06 55.8 30 70.0
Carub.0004s3061 Capsella rubella HOM05D008278 ORTHO05D009926 1.9e-06 55.5 30 70.0
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 2.5e-06 55.1 108 35.2
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 3.2e-06 54.7 61 50.8
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 4.2e-06 54.3 49 51.0
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 4.2e-06 54.3 27 74.1
Thhalv10001693m.g Eutrema salsugineum HOM05D008278 ORTHO05D009926 4.2e-06 54.3 39 64.1
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 7.1e-06 53.5 83 43.4
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 9.3e-06 53.1 54 51.9
Manes.03G191100 Manihot esculenta HOM05D008278 ORTHO05D009926 9.3e-06 53.1 43 58.1
vmacro14967 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 9.3e-06 53.1 32 68.8


User provided reference genes

Program Settings