Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 9.1e-156 553.5 277 100.0
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 6.2e-120 434.5 275 80.4
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 5.2e-111 404.8 273 77.3
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 5.2e-111 404.8 275 75.6
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.8e-111 404.4 275 76.0
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.3e-109 400.2 275 74.9
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.7e-90 336.7 274 65.3
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 3.0e-90 335.9 272 64.3
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 4.3e-89 332.0 277 63.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 2.1e-88 329.7 277 63.9
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 2.1e-88 329.7 275 64.4
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.6e-86 322.8 273 63.0
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 3.4e-86 322.4 277 62.8
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 5.8e-86 321.6 280 63.9
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 7.6e-86 321.2 278 61.9
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 1.7e-85 320.1 278 61.9
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.1e-84 317.4 278 62.6
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.9e-84 316.6 278 61.2
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 2.1e-83 313.2 281 61.2
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.9e-81 306.6 259 62.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 3.3e-81 305.8 272 61.0
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 7.4e-81 304.7 208 70.7
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 2.8e-80 302.8 276 59.4
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 3.6e-80 302.4 283 58.7
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.4e-79 300.4 274 59.9
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.9e-77 292.7 255 61.2
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.8e-77 292.4 271 58.3
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.8e-77 292.4 271 58.3
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 8.4e-77 291.2 216 66.7
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 1.9e-76 290.0 278 57.9
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 2.4e-76 289.7 276 56.5
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 9.3e-76 287.7 200 70.0
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.2e-75 287.3 283 56.9
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.1e-75 286.6 270 56.3
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.6e-75 285.4 267 56.9
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 2.3e-74 283.1 222 63.5
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 6.7e-74 281.6 277 57.0
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 8.7e-74 281.2 226 63.3
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.1e-73 280.8 231 60.6
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.1e-73 280.8 192 72.4
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.5e-73 280.4 218 63.3
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 3.3e-73 279.3 272 57.7
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 9.6e-73 277.7 272 56.2
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.6e-72 276.9 270 58.1
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.1e-72 276.6 275 54.9
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.8e-72 276.2 274 57.3
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 6.2e-72 275.0 270 57.8
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 6.2e-72 275.0 244 59.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 6.2e-72 275.0 275 57.1
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 8.1e-72 274.6 274 55.8
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.1e-71 274.2 213 62.0
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.8e-71 273.5 272 55.5
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 2.4e-71 273.1 210 64.3
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 3.1e-71 272.7 228 59.6
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 4.0e-71 272.3 283 54.1
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 6.9e-71 271.6 236 59.7
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.0e-70 270.0 277 53.1
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.4e-70 269.2 206 63.1
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.3e-69 267.3 199 64.8
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 2.2e-69 266.5 203 61.6
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 2.9e-69 266.2 226 60.6
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 2.9e-69 266.2 202 65.8
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 3.8e-69 265.8 204 65.2
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 4.9e-69 265.4 224 59.4
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 6.5e-69 265.0 251 56.2
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 6.5e-69 265.0 251 56.2
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 6.5e-69 265.0 251 56.2
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 6.5e-69 265.0 273 54.6
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.1e-68 264.2 269 54.6
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.1e-68 264.2 281 53.4
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.4e-68 263.8 198 66.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.4e-68 263.8 202 64.9
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 1.9e-68 263.5 219 62.1
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 5.5e-68 261.9 270 53.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 9.3e-68 261.2 279 52.7
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.2e-67 260.8 272 53.7
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-67 260.0 198 66.2
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 2.1e-67 260.0 253 53.8
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.7e-67 259.6 198 66.2
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.7e-67 259.6 205 62.0
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.0e-66 256.1 258 53.1
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 6.3e-64 248.4 266 53.0
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 8.2e-64 248.1 254 53.5
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.4e-63 247.3 270 51.1
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 3.1e-63 246.1 265 52.5
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 4.5e-62 242.3 202 57.4
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.7e-61 240.4 199 61.3
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.9e-61 239.6 197 60.9
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 8.5e-61 238.0 230 56.5
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 1.9e-60 236.9 197 61.4
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 3.2e-60 236.1 197 60.9
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 2.1e-59 233.4 193 59.6
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.3e-58 229.9 208 58.2
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 5.1e-58 228.8 226 52.2
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 2.4e-55 219.9 220 48.6
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 5.9e-54 215.3 257 46.7
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 4.6e-51 205.7 196 57.7
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 7.9e-51 204.9 198 56.6
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.0e-50 203.0 215 47.9
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.0e-50 203.0 215 47.9
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 3.7e-48 196.1 156 60.9
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 9.1e-47 191.4 204 54.9
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 2.3e-42 176.8 148 62.8
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.2e-37 160.2 184 44.0
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.6e-35 152.9 151 53.0
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.5e-33 147.5 223 37.2
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.9e-28 130.6 191 45.5
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 3.8e-21 106.3 185 31.4
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 5.0e-21 105.9 196 30.6
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.5e-20 103.6 123 43.9
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 5.5e-20 102.4 75 61.3
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 6.8e-18 95.5 144 36.1
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 8.8e-18 95.1 65 66.2
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.5e-17 92.0 70 55.7
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 2.7e-14 83.6 70 64.3
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 7.7e-14 82.0 70 62.9


User provided reference genes

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