Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G170000 Theobroma cacao HOM05D014525 ORTHO05D010720 3.1e-41 171.4 88 100.0
COL.COLO4_36151 Corchorus olitorius HOM05D014525 ORTHO05D010720 1.6e-21 105.9 95 69.5
Gohir.A09G127400 Gossypium hirsutum HOM05D014525 ORTHO05D010720 1.0e-20 103.2 90 66.7
Gorai.006G142200 Gossypium raimondii HOM05D014525 ORTHO05D010720 3.9e-20 101.3 90 65.6
Gohir.D09G123600 Gossypium hirsutum HOM05D014525 ORTHO05D010720 3.3e-19 98.2 90 65.6
CiPaw.09G031300 Carya illinoinensis HOM05D014525 ORTHO05D010720 9.7e-19 96.7 79 67.1
Nn7g37272 Nelumbo nucifera HOM05D011207 ORTHO05D010720 2.1e-13 79.0 87 58.6
Potri.016G047700 Populus trichocarpa HOM05D014525 ORTHO05D010720 1.4e-12 76.3 91 59.3
Prupe.6G017600 Prunus persica HOM05D011207 ORTHO05D010720 6.7e-12 73.9 88 52.3
Phvul.001G141400 Phaseolus vulgaris HOM05D014315 ORTHO05D010720 2.2e-10 68.9 91 52.7
Glyma.19G147000 Glycine max HOM05D014315 ORTHO05D010720 4.8e-10 67.8 90 52.2
Glyma.09G112600 Glycine max HOM05D014315 ORTHO05D010720 2.4e-09 65.5 81 54.3
Atru.chr8.1081 Acer truncatum HOM05D014525 ORTHO05D010720 4.1e-09 64.7 71 56.3
Glyma.02G178700 Glycine max HOM05D014315 ORTHO05D010720 5.3e-09 64.3 89 52.8
Manes.14G015100 Manihot esculenta HOM05D011207 ORTHO05D010720 5.3e-09 64.3 80 50.0
Prupe.7G075600 Prunus persica HOM05D029840 ORTHO05D010720 5.3e-09 64.3 86 50.0
Gohir.A08G077800 Gossypium hirsutum HOM05D011207 ORTHO05D010720 6.9e-09 63.9 89 51.7
Gohir.D08G087800 Gossypium hirsutum HOM05D011207 ORTHO05D010720 1.5e-08 62.8 89 50.6
Gorai.004G092400 Gossypium raimondii HOM05D011207 ORTHO05D010720 1.5e-08 62.8 89 50.6
Glyma.03G143900 Glycine max HOM05D014315 ORTHO05D010720 7.7e-08 60.5 83 50.6
Potri.003G212150 Populus trichocarpa HOM05D011207 ORTHO05D010720 7.7e-08 60.5 75 50.7
Potri.T084100 Populus trichocarpa HOM05D011207 ORTHO05D010720 1.3e-07 59.7 75 49.3
RcHm_v2.0_Chr3g0479931 Rosa chinensis HOM05D029840 ORTHO05D010720 1.3e-07 59.7 100 47.0
Medtr7g093050 Medicago truncatula HOM05D014315 ORTHO05D010720 8.5e-07 57.0 93 45.2
Manes.08G045700 Manihot esculenta HOM05D014525 ORTHO05D010720 1.1e-06 56.6 94 46.8
CiPaw.13G168100 Carya illinoinensis HOM05D011207 ORTHO05D010720 1.4e-06 56.2 87 46.0
Manes.09G033750 Manihot esculenta HOM05D014525 ORTHO05D010720 1.9e-06 55.8 91 44.0
Haze_11366 Corylus avellana HOM05D011207 ORTHO05D010720 7.2e-06 53.9 88 43.2
Cfa009664 Carpinus fangiana HOM05D000038 ORTHO05D000143 9.4e-06 53.5 56 51.8


User provided reference genes

Program Settings