Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 8.2e-296 1019.6 510 100.0
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 7.3e-244 847.0 509 83.1
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.0e-237 826.6 510 80.6
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.8e-210 736.1 513 73.9
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 4.5e-209 731.5 512 73.8
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 2.9e-208 728.8 512 72.1
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 4.2e-207 724.9 500 73.8
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 7.2e-207 724.2 495 72.5
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.4e-202 709.1 511 72.4
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 6.7e-197 691.0 510 70.2
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 1.4e-191 673.3 510 67.6
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 3.7e-187 658.7 465 70.3
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.6e-185 653.3 508 65.6
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 5.9e-185 651.4 508 65.6
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 5.0e-184 648.3 510 65.5
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.3e-181 639.4 400 80.2
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 5.2e-181 638.3 495 67.9
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 8.2e-179 630.9 508 64.6
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 1.0e-176 624.0 565 58.9
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 8.0e-174 614.4 508 62.2
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 1.5e-172 610.1 511 60.9
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.2e-171 606.3 381 78.2
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 1.4e-170 603.6 463 66.1
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 1.8e-162 576.6 481 60.5
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 4.1e-162 575.5 482 60.4
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 3.8e-160 568.9 497 61.2
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 5.0e-160 568.5 482 59.8
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 1.0e-157 560.8 479 59.7
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 7.0e-146 521.5 482 57.7
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.7e-136 490.3 510 53.5
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.1e-130 471.1 483 50.5
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 5.4e-130 468.8 474 50.6
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 3.3e-127 459.5 510 50.6
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 3.4e-124 449.5 476 50.0
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 2.5e-119 433.3 472 47.7
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.2e-113 414.5 408 55.4
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 7.9e-113 411.8 443 48.3
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 4.3e-111 406.0 348 62.4
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 5.8e-108 395.6 334 59.9
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 5.1e-96 355.9 297 63.0
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 1.7e-75 287.7 515 37.9
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 7.2e-66 255.8 182 68.7
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 3.5e-60 236.9 672 29.3
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 8.8e-56 222.2 158 69.6
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 1.0e-48 198.7 227 43.6
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 1.4e-37 161.8 145 64.1
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.1e-29 133.7 96 65.6
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 4.0e-24 117.1 77 74.0
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.1e-21 109.0 67 77.6
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 8.9e-16 89.4 100 44.0
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 9.9e-15 85.9 60 66.7
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.4e-13 82.0 61 59.0
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-12 77.4 115 41.7
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 1.8e-08 65.1 60 51.7
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 1.3e-06 58.9 45 62.2


User provided reference genes

Program Settings