Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 1.3e-88 329.7 167 100.0
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 6.2e-75 284.3 168 86.3
COL.COLO4_10307 Corchorus olitorius HOM05D007382 ORTHO05D009012 5.6e-60 234.6 166 74.7
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 1.2e-57 226.9 163 73.6
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 1.2e-57 226.9 163 73.6
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 3.4e-57 225.3 163 74.2
Ciclev10012925m.g Citrus clementina HOM05D007382 ORTHO05D009012 1.1e-44 183.7 165 63.0
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 1.3e-43 180.3 155 61.9
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 3.1e-42 175.6 142 62.7
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 2.2e-40 169.5 163 55.2
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 1.4e-39 166.8 143 59.4
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.9e-39 166.4 169 55.0
Manes.09G071800 Manihot esculenta HOM05D007382 ORTHO05D009012 1.9e-39 166.4 170 55.3
Nn3g20330 Nelumbo nucifera HOM05D007382 ORTHO05D009012 2.5e-39 166.0 165 52.7
Nn2g10574 Nelumbo nucifera HOM05D007382 ORTHO05D009012 5.5e-39 164.9 161 55.3
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 2.1e-38 162.9 161 57.1
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 2.1e-38 162.9 166 53.0
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 3.6e-38 162.2 129 61.2
QL07p045887 Quercus lobata HOM05D007382 ORTHO05D009012 4.6e-38 161.8 161 55.3
MELO3C003080.2 Cucumis melo HOM05D007382 ORTHO05D009012 1.0e-37 160.6 130 63.8
TAR369G0081 Trochodendron aralioides HOM05D007382 ORTHO05D009012 1.0e-37 160.6 160 53.8
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 3.9e-37 158.7 127 59.8
Cfa017470 Carpinus fangiana HOM05D007382 ORTHO05D009012 3.9e-37 158.7 163 52.8
Haze_20685 Corylus avellana HOM05D007382 ORTHO05D009012 8.8e-37 157.5 175 51.4
CsaV3_4G024470 Cucumis sativus L. HOM05D007382 ORTHO05D009012 1.1e-36 157.1 130 63.1
Eucgr.A01209 Eucalyptus grandis HOM05D007382 ORTHO05D009012 3.3e-36 155.6 141 55.3
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 5.7e-36 154.8 131 58.8
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 7.4e-36 154.5 128 59.4
Sc01g0003740 Simmondsia chinensis HOM05D007382 ORTHO05D009012 7.4e-36 154.5 165 47.9
Oeu029114.1 Olea europaea HOM05D007382 ORTHO05D009012 1.7e-35 153.3 155 51.6
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 2.8e-35 152.5 131 58.0
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 4.8e-35 151.8 129 57.4
ClCG04G008690 Citrullus lanatus HOM05D007382 ORTHO05D009012 8.2e-35 151.0 134 61.2
Glyma.03G175900 Glycine max HOM05D007382 ORTHO05D009012 1.4e-34 150.2 155 52.3
CAN.G435.4 Capsicum annuum HOM05D007382 ORTHO05D009012 1.8e-34 149.8 137 55.5
MSTRG.19120 Avicennia marina HOM05D007382 ORTHO05D009012 2.4e-34 149.4 136 56.6
ECA238G1385 Erigeron canadensis HOM05D007382 ORTHO05D009012 2.4e-34 149.4 129 55.0
Sopen10g033880 Solanum pennellii HOM05D007382 ORTHO05D009012 3.1e-34 149.1 136 55.1
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 4.1e-34 148.7 129 58.1
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 5.3e-34 148.3 162 51.2
Peaxi162Scf00472g00081 Petunia axillaris HOM05D007382 ORTHO05D009012 5.3e-34 148.3 136 52.2
Sed0019756 Sechium edule HOM05D007382 ORTHO05D009012 5.3e-34 148.3 135 56.3
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 9.1e-34 147.5 156 52.6
Solyc10g084440.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 1.5e-33 146.7 136 54.4
EL10Ac7g17270 Beta vulgaris HOM05D007382 ORTHO05D009012 3.4e-33 145.6 159 48.4
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 3.4e-33 145.6 129 53.5
Lsat_1_v5_gn_2_111101 Lactuca sativa HOM05D007382 ORTHO05D009012 3.4e-33 145.6 165 48.5
BcaC02g09988 Brassica carinata HOM05D007382 ORTHO05D009012 5.9e-33 144.8 121 58.7
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 5.9e-33 144.8 135 55.6
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 7.7e-33 144.4 136 57.4
Lsat_1_v5_gn_2_110741 Lactuca sativa HOM05D007382 ORTHO05D009012 1.0e-32 144.1 165 47.9
AUR62036838 Chenopodium quinoa HOM05D007382 ORTHO05D009012 1.3e-32 143.7 162 49.4
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 1.3e-32 143.7 127 55.9
Sp5g04630 Schrenkiella parvula HOM05D007382 ORTHO05D009012 1.3e-32 143.7 130 53.8
Ah.08g212080 Amaranthus hybridus HOM05D007382 ORTHO05D009012 2.2e-32 142.9 133 54.9
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 2.2e-32 142.9 138 52.2
PGSC0003DMG401010988 Solanum tuberosum HOM05D007382 ORTHO05D009012 2.9e-32 142.5 136 52.9
BcaB02g08277 Brassica carinata HOM05D007382 ORTHO05D009012 5.0e-32 141.7 121 56.2
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 6.5e-32 141.4 127 56.7
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 8.5e-32 141.0 127 54.3
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 1.1e-31 140.6 152 48.7
RcHm_v2.0_Chr3g0468081 Rosa chinensis HOM05D007382 ORTHO05D009012 1.4e-31 140.2 151 51.0
FvH4_6g14870 Fragaria vesca HOM05D007382 ORTHO05D009012 1.9e-31 139.8 149 51.7
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 3.2e-31 139.0 130 54.6
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 3.2e-31 139.0 149 51.7
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 4.2e-31 138.7 140 50.0
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 4.2e-31 138.7 174 45.4
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 5.5e-31 138.3 172 43.0
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 7.2e-31 137.9 149 51.0
HanXRQChr10g0297271 Helianthus annuus HOM05D007382 ORTHO05D009012 7.2e-31 137.9 120 53.3
Lsat_1_v5_gn_2_110841 Lactuca sativa HOM05D007382 ORTHO05D009012 7.2e-31 137.9 165 46.1
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 7.2e-31 137.9 130 56.2
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 7.2e-31 137.9 130 56.2
FAN09G0189 Fragaria x ananassa HOM05D007382 ORTHO05D009012 9.4e-31 137.5 149 50.3
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 9.4e-31 137.5 149 50.3
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 1.2e-30 137.1 130 53.1
Sed0025265 Sechium edule HOM05D007382 ORTHO05D009012 1.6e-30 136.7 146 55.5
Sopen09g026050 Solanum pennellii HOM05D007382 ORTHO05D009012 1.6e-30 136.7 132 53.8
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 2.7e-30 136.0 120 56.7
Sopen07g005520 Solanum pennellii HOM05D007382 ORTHO05D009012 3.6e-30 135.6 132 54.5
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 1.0e-29 134.0 142 49.3
CDE05G2022 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 1.4e-29 133.7 120 55.8
Solyc07g014660.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 1.4e-29 133.7 132 53.8
PGSC0003DMG400037466 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.1e-28 130.6 116 56.0
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 1.5e-28 130.2 110 60.0
C04p34300 Brassica napus HOM05D000180 ORTHO05D000099 2.6e-28 129.4 101 62.4
A04p02730 Brassica napus HOM05D000180 ORTHO05D000099 4.4e-28 128.6 100 63.0
BraA04t15999Z Brassica rapa HOM05D000180 ORTHO05D000099 4.4e-28 128.6 100 63.0
BolC4t24990H Brassica oleracea HOM05D000180 ORTHO05D000099 5.7e-28 128.3 101 62.4
Zm00001eb148770 Zea mays HOM05D007382 ORTHO05D009012 5.7e-28 128.3 160 44.4
CiPaw.15G123900 Carya illinoinensis HOM05D007382 ORTHO05D009012 2.8e-27 125.9 149 49.7
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 2.8e-27 125.9 129 51.2
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 1.1e-26 124.0 161 48.4
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 1.4e-26 123.6 132 48.5
Aqoxy5G00351 Aquilegia oxysepala HOM05D007382 ORTHO05D009012 1.4e-26 123.6 144 46.5
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 2.4e-26 122.9 149 46.3
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 5.0e-24 115.2 160 43.1
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 2.1e-22 109.8 124 47.6
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 8.0e-22 107.8 129 44.2
PGSC0003DMG400035622 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.8e-21 106.7 106 45.3
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 6.7e-21 104.8 134 44.8
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 2.6e-20 102.8 68 67.6
unitig_744.g24666 Utricularia gibba HOM05D007382 ORTHO05D009012 4.4e-20 102.1 133 42.1
HPP92_019795 Vanilla planifolia HOM05D007382 ORTHO05D009012 3.7e-19 99.0 122 46.7
CDE09G1151 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 4.8e-19 98.6 117 41.9
Lalb_Chr20g0113021 Lupinus albus HOM05D007382 ORTHO05D009012 1.8e-18 96.7 186 33.9
Lalb_Chr25g0289341 Lupinus albus HOM05D007382 ORTHO05D009012 5.9e-17 91.7 92 51.1
CDE12G0689 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 6.1e-14 81.6 78 46.2
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 1.3e-11 73.9 68 48.5
ATR0665G317 Amborella trichopoda HOM05D007382 ORTHO05D009012 2.0e-09 66.6 52 57.7
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 2.0e-09 66.6 71 49.3
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 1.7e-08 63.5 56 50.0
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 1.7e-08 63.5 95 38.9
SEGI_22784 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 9.4e-07 57.8 53 47.2
Pp3c14_21840 Physcomitrium patens HOM05D016889 ORTHO05D009012 2.1e-06 56.6 89 40.4
CBR_g33928 Chara braunii HOM05D001312 ORTHO05D001832 2.7e-06 56.2 54 50.0
TAR633G0943 Trochodendron aralioides HOM05D007382 ORTHO05D009012 2.7e-06 56.2 143 26.6
Pp3c17_18030 Physcomitrium patens HOM05D016889 ORTHO05D026570 4.7e-06 55.5 89 37.1


User provided reference genes

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