Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G305300 Theobroma cacao HOM05D008359 ORTHO05D010300 1.4e-60 237.3 277 100.0
unitig_749.g13356 Utricularia gibba HOM05D008359 ORTHO05D010300 2.9e-08 63.5 60 68.3
Duzib212G0105 Durio zibethinus HOM05D008359 ORTHO05D010300 6.4e-08 62.4 58 72.4
MD13G1149500 Malus domestica HOM05D008359 ORTHO05D010300 1.1e-07 61.6 83 80.7
CANSAT78G0680 Cannabis sativa HOM05D008359 ORTHO05D010300 1.4e-07 61.2 29 100.0
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 1.8e-07 60.8 58 62.1
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 1.8e-07 60.8 56 64.3
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 2.4e-07 60.5 55 58.2
Potri.010G148400 Populus trichocarpa HOM05D035266 ORTHO05D010300 2.4e-07 60.5 83 80.7
BcaB07g33802 Brassica carinata HOM05D008359 ORTHO05D010300 3.2e-07 60.1 29 96.6
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 3.2e-07 60.1 29 96.6
Haze_01345 Corylus avellana HOM05D008359 ORTHO05D010300 4.1e-07 59.7 31 90.3
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 7.0e-07 58.9 31 90.3
DCAR_030453 Daucus carota HOM05D008359 ORTHO05D010300 7.0e-07 58.9 60 78.3
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 9.2e-07 58.5 31 90.3
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 9.2e-07 58.5 29 89.7
Manes.03G207300 Manihot esculenta HOM05D008359 ORTHO05D010300 9.2e-07 58.5 86 80.2
CiPaw.02G072800 Carya illinoinensis HOM05D008359 ORTHO05D010300 1.2e-06 58.2 88 69.3
Gohir.A01G035400 Gossypium hirsutum HOM05D028176 ORTHO05D010300 1.2e-06 58.2 82 75.6
Prupe.1G113500 Prunus persica HOM05D008359 ORTHO05D010300 1.2e-06 58.2 73 90.4
MD16G1149800 Malus domestica HOM05D008359 ORTHO05D010300 2.0e-06 57.4 56 66.1
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 3.5e-06 56.6 27 96.3
MBI18_g27373_MAGBIO Magnolia biondii HOM05D008359 ORTHO05D010300 3.5e-06 56.6 28 96.4
CSS0040370 Camellia sinensis var. sinensis HOM05D008359 ORTHO05D010300 4.6e-06 56.2 85 71.8
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 4.6e-06 56.2 29 89.7
Sabra10G0114500 Salix brachista HOM05D008359 ORTHO05D010300 5.9e-06 55.8 26 100.0
PGSC0003DMG400001152 Solanum tuberosum HOM05D028028 ORTHO05D010300 5.9e-06 55.8 28 92.9
TWI09G1502 Tripterygium wilfordii HOM05D035266 ORTHO05D010300 5.9e-06 55.8 83 71.1
FAN12G0153 Fragaria x ananassa HOM05D008359 ORTHO05D010300 7.8e-06 55.5 73 86.3
Lj3P834T33 Lonicera japonica HOM05D008359 ORTHO05D010300 7.8e-06 55.5 26 100.0
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 7.8e-06 55.5 27 92.6


User provided reference genes

Program Settings