Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 3.1e-102 375.2 192 100.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 3.8e-68 261.9 175 80.0
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 4.1e-54 215.3 197 65.5
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 4.1e-54 215.3 197 65.5
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 2.0e-40 169.9 145 66.9
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 7.7e-37 157.9 192 50.5
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.2e-36 156.4 193 51.3
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.5e-35 153.7 190 52.6
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.2e-31 139.8 171 52.0
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 2.8e-31 139.4 192 49.0
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 2.2e-28 129.8 173 50.9
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 3.8e-28 129.0 191 43.5
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 5.5e-27 125.2 201 43.8
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 3.6e-26 122.5 200 44.0
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 8.8e-25 117.9 188 44.7
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.2e-23 113.2 200 41.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.7e-23 112.5 195 39.5
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 1.4e-22 110.5 194 43.3
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 5.4e-22 108.6 201 42.3
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 2.0e-21 106.7 180 41.7
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.7e-20 103.6 192 42.2
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 3.8e-20 102.4 192 42.2
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 1.9e-19 100.1 153 47.7
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 4.2e-19 99.0 176 41.5
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 2.1e-18 96.7 176 40.3
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 4.7e-18 95.5 177 39.5
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 6.8e-17 91.7 202 38.1
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 3.4e-16 89.4 194 38.1
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 6.3e-15 85.1 152 35.5
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.1e-14 84.3 173 38.2
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.4e-14 84.0 138 38.4
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.4e-14 83.2 192 30.7
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 4.1e-14 82.4 167 35.9
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 4.1e-14 82.4 87 51.7
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 5.4e-14 82.0 203 36.0
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 4.5e-13 79.0 138 42.0
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 5.9e-13 78.6 120 45.8
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 1.3e-12 77.4 184 35.3
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 3.8e-12 75.9 137 36.5
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 5.0e-12 75.5 192 34.9
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 5.0e-12 75.5 192 34.9
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 6.6e-12 75.1 143 37.1
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 8.6e-12 74.7 141 38.3
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.2e-10 70.9 192 34.9
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 2.8e-10 69.7 121 38.8
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 3.6e-10 69.3 189 37.0
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 6.1e-10 68.6 138 38.4
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 2.3e-09 66.6 114 38.6
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.1e-09 66.2 177 34.5
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 4.0e-09 65.9 122 33.6
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 4.0e-09 65.9 191 30.9
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 1.2e-08 64.3 119 38.7
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.5e-08 63.9 179 33.0
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.0e-08 63.5 121 38.0
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.6e-08 63.2 193 33.7
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.7e-07 59.3 118 33.9
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.7e-07 59.3 140 30.7
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 3.7e-07 59.3 245 27.8
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 3.7e-07 59.3 222 27.5
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 4.9e-07 58.9 134 34.3
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 6.4e-07 58.5 131 35.1
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 1.1e-06 57.8 141 35.5
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 1.9e-06 57.0 70 42.9
Duzib052G1064 Durio zibethinus HOM05D000655 ORTHO05D001635 2.4e-06 56.6 38 76.3
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 3.2e-06 56.2 179 27.4
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.2e-06 56.2 148 30.4
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 7.0e-06 55.1 149 34.2
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 9.2e-06 54.7 113 39.8
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 9.2e-06 54.7 158 30.4


User provided reference genes

Program Settings