Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 9.0e-259 896.3 436 100.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 7.4e-221 770.4 436 85.8
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 9.7e-213 743.4 438 83.1
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 3.7e-212 741.5 438 82.9
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 6.5e-209 730.7 401 86.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 5.1e-177 624.8 436 70.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.1e-176 623.6 435 67.1
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 3.6e-175 618.6 435 66.9
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 6.2e-175 617.8 436 67.2
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 5.8e-173 611.3 425 67.1
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.9e-172 609.0 435 65.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 3.2e-171 605.5 436 67.0
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 4.1e-171 605.1 437 67.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 7.1e-171 604.4 436 64.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 7.8e-170 600.9 435 66.4
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.6e-167 593.2 435 63.7
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 6.2e-167 591.3 436 64.2
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.1e-166 590.5 435 65.7
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.4e-166 590.1 435 64.1
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 5.2e-166 588.2 436 65.6
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.2e-165 587.0 435 63.4
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.0e-165 586.3 421 65.8
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 5.8e-165 584.7 434 64.7
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.9e-164 582.4 434 64.3
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 2.9e-164 582.4 435 62.8
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 2.4e-163 579.3 435 63.4
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 5.4e-163 578.2 435 61.8
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.2e-162 577.0 435 61.8
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 6.0e-162 574.7 435 61.6
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.3e-161 573.5 435 64.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.5e-160 570.1 425 64.2
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.9e-160 569.7 435 62.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.9e-160 569.7 438 63.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.9e-160 569.7 438 63.2
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 3.3e-160 568.9 435 60.7
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 3.3e-160 568.9 435 62.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 3.3e-160 568.9 436 62.2
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 7.3e-160 567.8 399 67.4
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.1e-159 564.3 425 63.8
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.8e-158 563.1 431 60.3
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 4.0e-158 562.0 436 61.7
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.2e-157 560.5 434 62.9
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 2.6e-157 559.3 425 63.3
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 4.4e-157 558.5 420 64.8
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 7.6e-157 557.8 425 63.1
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 9.9e-157 557.4 437 62.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 9.9e-157 557.4 448 60.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 9.9e-157 557.4 436 62.4
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.7e-156 556.6 425 63.1
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.0e-153 547.4 444 61.7
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 2.3e-153 546.2 444 61.5
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.9e-152 543.1 458 59.0
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.1e-151 537.7 438 59.6
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 9.0e-150 534.3 420 62.4
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.5e-149 533.5 391 65.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.3e-148 530.4 437 58.8
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.8e-148 528.9 438 58.4
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.4e-148 527.7 438 58.7
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.9e-147 526.6 389 63.8
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.9e-147 526.6 432 61.6
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.2e-147 525.8 433 58.7
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.0e-145 519.2 433 59.6
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 3.0e-145 519.2 414 61.1
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.1e-144 517.3 436 56.7
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.9e-144 516.5 414 61.1
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 4.3e-144 515.4 529 51.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 7.4e-144 514.6 421 60.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 4.2e-139 498.8 433 57.0
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 7.1e-139 498.0 423 57.9
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.6e-138 496.9 414 56.8
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.5e-136 489.6 454 55.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.1e-135 486.5 362 63.0
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.8e-135 486.1 361 62.9
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 4.8e-135 485.3 433 55.2
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.7e-132 476.9 433 54.7
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.1e-130 469.9 362 62.2
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.5e-130 469.2 663 40.9
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.3e-129 467.2 375 60.5
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.3e-129 467.2 375 60.8
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 8.7e-129 464.5 416 55.3
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.5e-128 463.0 425 56.2
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 5.3e-126 455.3 425 55.5
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 5.3e-126 455.3 425 55.5
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.2e-125 454.1 414 55.1
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 2.6e-125 453.0 424 55.7
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.3e-124 450.7 413 55.2
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 2.5e-123 446.4 415 55.4
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 3.2e-123 446.0 413 55.2
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.5e-123 445.3 418 55.0
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 2.0e-120 436.8 425 52.9
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 7.4e-120 434.9 416 52.9
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 2.8e-119 433.0 308 66.9
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 2.1e-114 416.8 416 49.8
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 7.4e-112 408.3 304 62.2
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.8e-108 396.0 416 47.8
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.6e-90 337.4 295 56.9
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 3.5e-77 293.1 472 38.1
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 8.0e-74 282.0 235 59.1
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.2e-72 278.1 272 54.4
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.6e-66 257.7 460 36.1
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 6.0e-61 239.2 215 52.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 4.0e-57 226.5 198 58.1
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 4.4e-56 223.0 217 53.0
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.8e-47 193.4 150 62.0
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 8.4e-47 192.2 188 51.1
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.1e-42 177.6 178 49.4
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.4e-40 170.2 245 41.2
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.2e-37 161.8 113 65.5
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.2e-37 161.8 123 61.8
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.4e-30 137.5 111 58.6
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 4.5e-16 90.1 103 41.7
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.7e-15 88.2 100 45.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.5e-13 80.5 77 54.5
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 2.3e-12 77.8 98 46.9
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 2.2e-07 61.2 200 27.5
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 2.9e-07 60.8 50 62.0
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.4e-06 58.5 76 42.1
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 4.2e-06 57.0 222 26.1


User provided reference genes

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