Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 6.8e-134 480.7 252 100.0
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 6.6e-129 464.2 252 94.8
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 3.3e-128 461.8 252 94.0
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 4.3e-128 461.5 252 94.0
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 5.1e-121 438.0 252 89.7
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-120 436.8 252 89.3
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.5e-120 436.4 252 86.9
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.9e-120 436.0 252 88.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 3.3e-120 435.3 252 88.5
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 4.3e-120 434.9 250 88.0
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 5.6e-120 434.5 252 87.7
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 7.3e-120 434.1 251 88.0
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 87.7
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 3.6e-119 431.8 252 87.7
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 88.9
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 88.1
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 86.9
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 3.1e-118 428.7 252 86.9
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 87.3
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.5e-117 426.4 252 86.5
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 87.3
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 88.1
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 86.5
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 86.9
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 86.9
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 86.5
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 86.9
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 87.7
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 9.9e-117 423.7 252 86.5
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.7e-116 422.9 253 87.4
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.1
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 3.8e-116 421.8 254 86.6
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 86.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 86.5
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 83.7
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 84.9
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 85.7
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 2.4e-115 419.1 254 85.4
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 3.2e-115 418.7 250 84.8
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 85.7
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.3
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 85.3
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 5.4e-115 417.9 252 84.9
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 84.5
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 85.7
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 83.7
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 83.7
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 82.5
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 82.5
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.3e-113 413.3 252 84.1
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 84.9
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 84.9
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 83.7
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 83.3
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 84.5
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 5.1e-113 411.4 249 84.3
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 5.1e-113 411.4 252 84.5
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 6.6e-113 411.0 281 77.9
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 84.1
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 8.7e-113 410.6 252 82.1
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 8.7e-113 410.6 252 84.9
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 81.7
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 1.5e-112 409.8 283 76.7
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 82.9
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.9e-112 409.5 253 84.2
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 84.1
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 83.7
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 83.3
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 82.9
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 5.6e-112 407.9 250 83.6
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 5.6e-112 407.9 252 83.3
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 5.6e-112 407.9 256 83.2
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 5.6e-112 407.9 256 82.8
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 1.2e-111 406.8 250 83.6
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 82.1
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 1.6e-111 406.4 250 82.4
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 2.1e-111 406.0 254 82.7
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 2.1e-111 406.0 252 84.1
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 80.6
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 6.2e-111 404.4 250 83.2
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.4e-110 402.5 260 81.5
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 3.4e-109 398.7 260 80.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 3.4e-109 398.7 253 80.2
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 7.6e-109 397.5 252 81.0
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 9.9e-109 397.1 252 81.3
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 6.4e-108 394.4 283 75.6
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 5.4e-107 391.3 239 83.7
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 3.5e-106 388.7 252 80.2
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 9.0e-102 374.0 256 75.0
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 1.5e-101 373.2 256 75.0
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.0e-101 372.9 272 74.6
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 3.8e-100 368.6 221 86.0
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.2e-98 363.6 252 75.0
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 4.6e-98 361.7 254 73.2
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 1.9e-96 356.3 267 70.4
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 1.6e-95 353.2 252 73.4
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 6.2e-95 351.3 190 93.7
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.0e-94 348.6 252 72.2
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 4.0e-94 348.6 252 75.8
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 2.2e-92 342.8 260 71.5
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 5.8e-85 318.2 274 67.2
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 1.9e-83 313.2 229 72.5
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 3.0e-81 305.8 191 82.7
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 6.7e-81 304.7 177 89.3
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 6.3e-79 298.1 252 63.5
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 8.2e-79 297.7 177 85.9
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 4.1e-78 295.4 176 84.7
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 6.7e-73 278.1 278 55.8
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 9.7e-72 274.2 255 57.3
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.3e-63 247.3 252 56.7
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 6.3e-63 245.0 145 84.8
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.4e-62 243.8 254 52.4
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 9.4e-59 231.1 146 80.1
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 8.2e-55 218.0 254 47.6
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.0e-49 201.1 123 79.7
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.1e-35 154.5 91 83.5
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 6.8e-33 145.2 86 87.2
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 7.5e-32 141.7 96 74.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.0e-24 117.1 95 63.2
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 5.8e-16 89.0 48 91.7
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.5e-13 79.7 62 62.9
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 8.1e-10 68.6 34 85.3
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 2.6e-08 63.5 48 64.6


User provided reference genes

Program Settings